Ogr08578 (Ophisaurus gracilis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Ogr08578 T242632_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFY2
M03326_2.00
Homo sapiens
WTCGAWNVRWTCGAW

WTCGAWYBNWTCGAW
SELEX
Jolma et al.(2013)
HSFY2_1
0.494 0.674
HSFY2
M03327_2.00
Homo sapiens
CRTTCGAWW

WWTCGAAYG
SELEX
Jolma et al.(2013)
HSFY2_2
0.494 0.674
HSFY2
M03328_2.00
Homo sapiens
DTCGAAHSNWTCGAW

WTCGAWNSDTTCGAH
SELEX
Jolma et al.(2013)
HSFY2_3
0.494 0.674
HSFY1
M05515_2.00
Homo sapiens
NDTVGAAYGWTTCGAAYGB

VCRTTCGAAWCRTTCBAHN
SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_1
0.494 0.674
HSFY1
M05516_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_2
0.494 0.674
HSFY2
M05511_2.00
Homo sapiens
NDTVGAAYGWTTCGAAYGB

VCRTTCGAAWCRTTCBAHN
SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_1
0.494 0.674
HSFY2
M05512_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_2
0.494 0.674
HSFY1
M05517_2.00
Homo sapiens
NDTRGAATGTTTRGAATGB

VCATTCYAAACATTCYAHN
SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_1
0.494 0.674
HSFY1
M05518_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_2
0.494 0.674
HSFY2
M05513_2.00
Homo sapiens
NDWRGAAYGTTTRGAAYGB

VCRTTCYAAACRTTCYWHN
SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_1
0.494 0.674
HSFY2
M05514_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_2
0.494 0.674
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr08578 HSF 97 212

Links

Other HSF family TFs
Other Ophisaurus gracilis TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo2g161690 Brassica oleracea Bo2g161690 I 0.000
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.000
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.000
estExt_fgenesh1_pg.C_740147 Physcomitrella patens estExt_fgenesh1_pg.C_740147 I 0.000
mgf013601m Mimulus guttatus mgf013601m I 0.000
Ciclev10033942m.g Citrus clementina Ciclev10033942m.g I 0.000
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.000
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.000
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.000
orange1.1g044766m.g Citrus sinensis orange1.1g044766m.g I 0.000
SapurV1A.2394s0010 Salix purpurea SapurV1A.2394s0010 I 0.000
cassava19992.m1 Manihot esculenta cassava19992.m1 I 0.000
30147.m014401 Ricinus communis 30147.m014401 I 0.000
Cla019619 Citrullus lanatus Cla019619 I 0.000
Bra029305 Brassica rapa Bra029305 I 0.000
GLYMA06G17170 Glycine max GLYMA06G17170 I 0.000
MTR_3g098560 Medicago truncatula MTR_3g098560 I 0.000
FL Populus trichocarpa POPTR_0015s11820 I 0.000
chr1.CM0094.750.nd Lotus japonicus chr1.CM0094.750.nd I 0.000
SELMODRAFT_85923 Selaginella moellendorffii SELMODRAFT_85923 I 0.000
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.000
TCM_014768 Theobroma cacao TCM_014768 I 0.000
LFY Vitis vinifera VIT_17s0000g00150 I 0.000
Ca_01386 Cicer arietinum Ca_01386 I 0.000
SELMODRAFT_417910 Selaginella moellendorffii SELMODRAFT_417910 N 0.000