CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.31.51.1
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
e_gw1.31.51.1
T242784_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.31.51.1
HSF
51
155
FLRKTYEMINTCNPELAGWSEDGKTFVVYDNNKFAEETIPQFFKHNNFASFVRQLNFYGFKKIKYDPIRINRDQESSKESKYWPFHHDKFLRGRPDLLCEIKKSN
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_J44029
Phaeodactylum tricornutum
Phatr3_J44029
N
0.520
Phatr3_J34724
Phaeodactylum tricornutum
Phatr3_J34724
N
0.482
Phatr3_J33380
Phaeodactylum tricornutum
Phatr3_J33380
N
0.481
maker-pve_contig_139-fgenesh-gene-0.10
Pythium vexans
maker-pve_contig_139-fgenesh-gene-0.10
N
0.453
Phatr3_J45112
Phaeodactylum tricornutum
Phatr3_J45112
N
0.452
HpaG812965
Hyaloperonospora arabidopsidis
HpaG812965
N
0.435
Physo135389
Phytophthora sojae
Physo135389
N
0.434
gw1.7.507.1
Phytophthora capsici
gw1.7.507.1
N
0.433
estExt_fgenesh1_kg.C_18600002
Phytophthora capsici
estExt_fgenesh1_kg.C_18600002
N
0.433
maker-pir_contig_1488-snap-gene-0.4
Pythium irregulare
maker-pir_contig_1488-snap-gene-0.4
N
0.432
Thaps4315
Thalassiosira pseudonana
Thaps4315
N
0.412
Phatr3_J42824
Phaeodactylum tricornutum
Phatr3_J42824
N
0.411
PYU1_G014028
Pythium ultimum
PYU1_G014028
N
0.410
SPRG_08046
Saprolegnia parasitica
SPRG_08046
N
0.408
e_gw1.56.45.1
Fragilariopsis cylindrus
e_gw1.56.45.1
N
0.407
F443_12676
Phytophthora parasitica
F443_12676
N
0.405
PITG_08199
Phytophthora infestans
PITG_08199
N
0.405
Phatr3_J33622
Phaeodactylum tricornutum
Phatr3_J33622
N
0.401
ALNC14_005160
Albugo laibachii
ALNC14_005160
N
0.400
maker-pir_contig_16-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_16-fgenesh-gene-0.1
N
0.399
PYU1_G011054
Pythium ultimum
PYU1_G011054
N
0.397
fgenesh_scip_prom.46568.615
Phytophthora kernoviae
fgenesh_scip_prom.46568.615
N
0.395
fgenesh_scip_prom.28083.6132
Phytophthora lateralis
fgenesh_scip_prom.28083.6132
N
0.393
Phyra78686
Phytophthora ramorum
Phyra78686
N
0.393
maker-par_contig_3120-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_3120-fgenesh-gene-0.1
I
0.392
Thaps24112
Thalassiosira pseudonana
Thaps24112
N
0.392
estExt_Genewise1.C_61306
Fragilariopsis cylindrus
estExt_Genewise1.C_61306
N
0.391
maker-piw_contig_424-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_424-fgenesh-gene-0.5
N
0.389
maker-pag1_scaffold_219-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_219-snap-gene-0.16
I
0.385
PITG_06935
Phytophthora infestans
PITG_06935
N
0.378
ALNC14_105430
Albugo laibachii
ALNC14_105430
N
0.373
Physo157297
Phytophthora sojae
Physo157297
N
0.373
ALNC14_059320
Albugo laibachii
ALNC14_059320
N
0.373
maker-pag1_scaffold_1-fgenesh-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_1-fgenesh-gene-0.16
N
0.367
SPRG_00754
Saprolegnia parasitica
SPRG_00754
N
0.367
fgenesh_scip_prom.28083.184
Phytophthora lateralis
fgenesh_scip_prom.28083.184
N
0.365
Phyra79919
Phytophthora ramorum
Phyra79919
N
0.359
F443_17091
Phytophthora parasitica
F443_17091
N
0.357
HpaG805361
Hyaloperonospora arabidopsidis
HpaG805361
N
0.354
maker-par_contig_884-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_884-fgenesh-gene-0.0
N
0.350
e_gw1.8.474.1
Fragilariopsis cylindrus
e_gw1.8.474.1
N
0.341
HSF3
Phaeodactylum tricornutum
Phatr3_J44200
N
0.340
SPRG_01593
Saprolegnia parasitica
SPRG_01593
I
0.339
EuGene.0200010072
Micromonas sp RCC299
EuGene.0200010072
I
0.337
Thaps22124
Thalassiosira pseudonana
Thaps22124
N
0.335
71265
Aureococcus anophagefferens
71265
N
0.332
Thaps269474
Thalassiosira pseudonana
Thaps269474
N
0.327
SPRG_16586
Saprolegnia parasitica
SPRG_16586
N
0.320
Thaps262941
Thalassiosira pseudonana
Thaps262941
N
0.318