CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.5.1185.1
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
e_gw1.5.1185.1
T242789_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.5.1185.1
HSF
34
130
FPLKLHETLTQIDKDGYDDIIGWLPHGRSFKIHKQKEFTDIILPRYFVMTKKSSFLRQLNLYSFNRFSGTSPNKGSYYHEKFLRGKKFLTRRMTRQK
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_J44684
Phaeodactylum tricornutum
Phatr3_J44684
N
0.380
Contig10067.0.g63
Oxytricha trifallax
Contig10067.0.g63
I
0.373
Contig10723.0.g13
Oxytricha trifallax
Contig10723.0.g13
I
0.373
Phatr3_EG00322
Phaeodactylum tricornutum
Phatr3_EG00322
N
0.353
e_gw1.27.180.1
Fragilariopsis cylindrus
e_gw1.27.180.1
N
0.348
Thaps6958
Thalassiosira pseudonana
Thaps6958
N
0.344
Phatr3_J48361
Phaeodactylum tricornutum
Phatr3_J48361
N
0.341
estExt_Genewise1Plus.C_91152
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_91152
I
0.341
Phatr3_J49594
Phaeodactylum tricornutum
Phatr3_J49594
I
0.340
fgenesh2_pg.26_#_250
Fragilariopsis cylindrus
fgenesh2_pg.26_#_250
N
0.336
Bra017595
Brassica rapa
Bra017595
I
0.335
Bo9g062710
Brassica oleracea
Bo9g062710
I
0.335
Phatr3_J49566
Phaeodactylum tricornutum
Phatr3_J49566
N
0.331
Thaps22932
Thalassiosira pseudonana
Thaps22932
N
0.330
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.330
e_gw1.21.303.1
Fragilariopsis cylindrus
e_gw1.21.303.1
N
0.328
gw1.1.2017.1
Fragilariopsis cylindrus
gw1.1.2017.1
N
0.327
Phatr3_J39786
Phaeodactylum tricornutum
Phatr3_J39786
N
0.327
LPERR01G26480
Leersia perrieri
LPERR01G26480
I
0.326
Phatr3_Jdraft1650
Phaeodactylum tricornutum
Phatr3_Jdraft1650
N
0.326
Phatr3_J49557
Phaeodactylum tricornutum
Phatr3_J49557
N
0.325
Thaps7395
Thalassiosira pseudonana
Thaps7395
N
0.325
Thaps7394
Thalassiosira pseudonana
Thaps7394
N
0.325
Phatr3_J49596
Phaeodactylum tricornutum
Phatr3_J49596
N
0.325
Carubv10026722m.g
Capsella rubella
Carubv10026722m.g
I
0.324
Cagra.0796s0014
Capsella grandiflora
Cagra.0796s0014
I
0.324
gw1.27.181.1
Fragilariopsis cylindrus
gw1.27.181.1
N
0.323
Cagra.2848s0007
Capsella grandiflora
Cagra.2848s0007
I
0.323
Phatr3_J39785
Phaeodactylum tricornutum
Phatr3_J39785
N
0.323
MDP0000191541
Malus domestica
MDP0000191541
I
0.322
HSFA4C
Arabidopsis thaliana
AT5G45710
I
0.322
PRUPE_ppa006514mg
Prunus persica
PRUPE_ppa006514mg
I
0.321
Pm005887
Prunus mume
Pm005887
I
0.321
Gorai.006G158000
Gossypium raimondii
Gorai.006G158000
I
0.320
GLYMA10G07620
Glycine max
GLYMA10G07620
I
0.320
Phatr3_EG00212
Phaeodactylum tricornutum
Phatr3_EG00212
N
0.319
Thaps22454
Thalassiosira pseudonana
Thaps22454
I
0.319
gw1.3.1151.1
Fragilariopsis cylindrus
gw1.3.1151.1
N
0.319
Bostr.8819s0096
Boechera stricta
Bostr.8819s0096
I
0.319
gw1.14.342.1
Fragilariopsis cylindrus
gw1.14.342.1
N
0.318