estExt_fgenesh1_pm.C_sca_3_chr4_2_00056 (Nectria haematococca)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 estExt_fgenesh1_pm.C_sca_3_chr4_2_00056 T242816_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SKN7
M00061_2.00
Saccharomyces cerevisiae
AYGGCCRG

CYGGCCRT
PBM
Badis et al.(2008)
SKN7_2117
0.333 0.573
SKN7
M01555_2.00
Saccharomyces cerevisiae
NBGGCBDNNN

NNNHVGCCVN
PBM
Zhu et al.(2009)
Skn7
0.333 0.573
SKN7
M07490_2.00
Saccharomyces cerevisiae
GGCCRN

NYGGCC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0381.1
0.333 0.573
SKN7
M08582_2.00
Saccharomyces cerevisiae
GBCBVGSCS

SGSCBVGVC
Misc
DeBoer et al.(2011)
YHR206W_380
0.333 0.573
SKN7
M08583_2.00
Saccharomyces cerevisiae
GGCCRN

NYGGCC
Misc
DeBoer et al.(2011)
YHR206W_583
0.333 0.573
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_sca_3_chr4_2_00056 HSF 20 123

Links

Other HSF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action