fgenesh2_pg.scaffold_315000002 (Branchiostoma floridae)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 fgenesh2_pg.scaffold_315000002 T242884_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF5
M05519_2.00 		Homo sapiens
NRCRTTCTAGAACGYN
NRCGTTCTAGAAYGYN		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_1 		0.350 0.442
HSF5
M05520_2.00 		Homo sapiens
YVGAAYRYNNNNNNNNNBHACRTTCBR
YVGAAYGTDVNNNNNNNNNRYRTTCBR		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_2 		0.350 0.442
HSF5
M05521_2.00 		Homo sapiens
AACRTTCTAGAAYGTT
AACRTTCTAGAAYGTT		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_1 		0.350 0.442
HSF5
M05522_2.00 		Homo sapiens
YRGAAYDYNVNNNNNNNBAACRTTCYR
YRGAAYGTTVNNNNNNNBNRHRTTCYR		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_2 		0.350 0.442
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_315000002 HSF 20 127

Links

Other HSF family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action