gw1.54.53.1 (Phycomyces blakesleeanus)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 gw1.54.53.1 T242925_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSF4
M03325_2.00
Homo sapiens
GAANNTTCBVGAA

TTCBVGAANNTTC
SELEX
Jolma et al.(2013)
HSF4_1
0.356 0.557
HSF4
M05509_2.00
Homo sapiens
VGAABVTTCKVGAAN

NTTCBMGAABVTTCB
SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX
0.356 0.557
HSF4
M10862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF4_Q3
0.356 0.557
HSF4
M05510_2.00
Homo sapiens
RGAABVWDCYRGAWN

NWTCYRGHWBVTTCY
SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX
0.356 0.557
HSF1
M03329_2.00
Homo sapiens
GAANVTTCBVGAA

TTCBVGAABNTTC
SELEX
Jolma et al.(2013)
HSF1_1
0.348 0.532
HSF1
M03330_2.00
Homo sapiens
GAANRTTCBAGAA

TTCTVGAAYNTTC
SELEX
Jolma et al.(2013)
HSF1_2
0.348 0.532
HSF1
M05523_2.00
Homo sapiens
VGAABVTTCBVGAWN

NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX
0.348 0.532
HSF1
M05525_2.00
Homo sapiens
VGAANRTTCKVGAAN

NTTCBMGAAYNTTCB
SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX
0.348 0.532
HSF1
M07977_2.00
Homo sapiens
GDCSYGGGTTCRADYCCC

GGGRHTYGAACCCRSGHC
ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford
0.348 0.532
HSF1
M09230_2.00
Homo sapiens
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A
0.348 0.532
Hsf1
M09232_2.00
Mus musculus
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A
0.348 0.532
HSF1
M09592_2.00
Homo sapiens
NNBBCYRGAANNTTCYRGVV

BBCYRGAANNTTCYRGVVNN
Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477
0.348 0.532
Hsf1
M09593_2.00
Mus musculus
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000
0.348 0.532
HSF1
M10863_2.00
Homo sapiens
NGAAHNTTCY

RGAANDTTCN
Transfac
Matys et al.(2006)
V$HSF1_01
0.348 0.532
HSF1
M10864_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5_01
0.348 0.532
HSF1
M10865_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5
0.348 0.532
HSF1
M10866_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6_01
0.348 0.532
HSF1
M10867_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6
0.348 0.532
HSF1
M10868_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF_Q6
0.348 0.532
HSF1
M05524_2.00
Homo sapiens
RGAANRTTCYRGAWN

NWTCYRGAAYNTTCY
SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX
0.348 0.532
HSF1
M05526_2.00
Homo sapiens
RGAANVTTCYRGAWN

NWTCYRGAABNTTCY
SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX
0.348 0.532
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB

VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.333 0.582
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA

TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.333 0.582
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN

NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.321 0.519
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.321 0.519
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA

TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.321 0.519
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA

TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.321 0.519
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.321 0.519
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA

TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.321 0.519
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN

NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.321 0.519
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY

RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.321 0.519
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN

NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.321 0.519
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN

NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.321 0.519
HSF1
M10878_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.321 0.519
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.54.53.1 HSF 3 87

Links

Other HSF family TFs
Other Phycomyces blakesleeanus TFs

Invalid Input OrderBy

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action