Bostr.30275s0431 (Boechera stricta)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Bostr.30275s0431 T243001_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.365 0.483
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.324 0.368
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.324 0.368
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.322 0.356
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.322 0.356
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.30275s0431.1.p HSF 13 103

Links

Other HSF family TFs
Other Boechera stricta TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_601314.1 Arabidopsis lyrata scaffold_601314.1 I 0.398
Carubv10027643m.g Capsella rubella Carubv10027643m.g I 0.396
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I 0.377
Bostr.0556s0470 Boechera stricta Bostr.0556s0470 I 0.377
Ca_08627 Cicer arietinum Ca_08627 I 0.375
Bra030021 Brassica rapa Bra030021 I 0.374
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.373
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.373
PK09831.1 Cannabis sativa PK09831.1 I 0.373
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.373
Carubv10006025m.g Capsella rubella Carubv10006025m.g I 0.372
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.372
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.371
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.371
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.370
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.370
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.368
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.368
Bo1g021700 Brassica oleracea Bo1g021700 I 0.368
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.368
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.368
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.367
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.367
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.367
Bra012571 Brassica rapa Bra012571 I 0.365
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.365
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.365
HSFA4A Arabidopsis thaliana AT4G18880 D 0.365
Bra020988 Brassica rapa Bra020988 I 0.365
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.365
MDP0000126826 Malus domestica MDP0000126826 I 0.365
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.365
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.365
Bo7g106320 Brassica oleracea Bo7g106320 I 0.365
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.365
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.365
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.365
mgf006143m Mimulus guttatus mgf006143m I 0.364
Bra013358 Brassica rapa Bra013358 I 0.364
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.363
Bo1g020010 Brassica oleracea Bo1g020010 I 0.363
Bo3g157380 Brassica oleracea Bo3g157380 I 0.363
TCM_029630 Theobroma cacao TCM_029630 I 0.361
Thhalv10026540m.g Eutrema salsugineum Thhalv10026540m.g I 0.360
orange1.1g015635m.g Citrus sinensis orange1.1g015635m.g I 0.359
scaffold_702446.1 Arabidopsis lyrata scaffold_702446.1 N 0.359
fgenesh1_pg.C_scaffold_7000870 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000870 I 0.358
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I 0.357
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.357
Carubv10007333m.g Capsella rubella Carubv10007333m.g I 0.357
Pm010169 Prunus mume Pm010169 I 0.357
Thhalv10027510m.g Eutrema salsugineum Thhalv10027510m.g I 0.357
Gorai.010G240800 Gossypium raimondii Gorai.010G240800 I 0.357
scaffold_702717.1 Arabidopsis lyrata scaffold_702717.1 I 0.356
POPTR_0004s06090 Populus trichocarpa POPTR_0004s06090 I 0.356
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.355
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.354
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.353
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.353
Lus10029269.g Linum usitatissimum Lus10029269.g I 0.353
Bo1g005040 Brassica oleracea Bo1g005040 I 0.351
evm.TU.supercontig_124.4 Carica papaya evm.TU.supercontig_124.4 I 0.351
Thhalv10028026m.g Eutrema salsugineum Thhalv10028026m.g I 0.351
Carubv10024599m.g Capsella rubella Carubv10024599m.g I 0.351
PGSC0003DMG401027812 Solanum tuberosum PGSC0003DMG401027812 I 0.349
SapurV1A.0181s0030 Salix purpurea SapurV1A.0181s0030 I 0.349
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.348
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.348
Solyc03g006000.2 Solanum lycopersicum Solyc03g006000.2 I 0.348
Bra002882 Brassica rapa Bra002882 I 0.347
Thhalv10028027m.g Eutrema salsugineum Thhalv10028027m.g I 0.347
Gorai.007G053900 Gossypium raimondii Gorai.007G053900 I 0.346
Bra029226 Brassica rapa Bra029226 I 0.346
Ca_00428 Cicer arietinum Ca_00428 I 0.346
30026.m001484 Ricinus communis 30026.m001484 I 0.346
Aquca_014_00743 Aquilegia coerulea Aquca_014_00743 I 0.345
Cucsa.164290 Cucumis sativus Cucsa.164290 I 0.345
chr4.CM0046.500.nc Lotus japonicus chr4.CM0046.500.nc I 0.344
Bra025611 Brassica rapa Bra025611 N 0.343
Thhalv10012073m.g Eutrema salsugineum Thhalv10012073m.g I 0.343
GLYMA15G09280 Glycine max GLYMA15G09280 I 0.343
Al_scaffold_0003_3814 Arabidopsis lyrata Al_scaffold_0003_3814 I 0.342
VIT_12s0028g01410 Vitis vinifera VIT_12s0028g01410 I 0.342
Bo01835s010 Brassica oleracea Bo01835s010 N 0.342
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I 0.342
Bra025606 Brassica rapa Bra025606 I 0.341
Bo2g165560 Brassica oleracea Bo2g165560 I 0.341
Bo4g139200 Brassica oleracea Bo4g139200 I 0.341
Ciclev10015472m.g Citrus clementina Ciclev10015472m.g I 0.340
Lus10019348.g Linum usitatissimum Lus10019348.g I 0.340
Lus10009351.g Linum usitatissimum Lus10009351.g I 0.340
PK02428.1 Cannabis sativa PK02428.1 I 0.340
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.339
Bo4g139630 Brassica oleracea Bo4g139630 I 0.339
Solyc02g090820.2 Solanum lycopersicum Solyc02g090820.2 I 0.339
PGSC0003DMG401004023 Solanum tuberosum PGSC0003DMG401004023 I 0.339
scaffold_702873.1 Arabidopsis lyrata scaffold_702873.1 I 0.338
Cagra.13025s0006 Capsella grandiflora Cagra.13025s0006 I 0.338
PK12544.1 Cannabis sativa PK12544.1 I 0.338
Bra025635 Brassica rapa Bra025635 I 0.337
SapurV1A.3884s0010 Salix purpurea SapurV1A.3884s0010 I 0.337
SapurV1A.0029s0230 Salix purpurea SapurV1A.0029s0230 I 0.337
Bostr.27895s0020 Boechera stricta Bostr.27895s0020 N 0.337
Ca_09277 Cicer arietinum Ca_09277 I 0.335
Gorai.013G183500 Gossypium raimondii Gorai.013G183500 I 0.335
POPTR_0006s11680 Populus trichocarpa POPTR_0006s11680 I 0.334
Eucgr.I00929 Eucalyptus grandis Eucgr.I00929 I 0.334
Solyc07g055710.2 Solanum lycopersicum Solyc07g055710.2 I 0.333
Eucgr.A01948 Eucalyptus grandis Eucgr.A01948 I 0.333
evm.TU.supercontig_55.150 Carica papaya evm.TU.supercontig_55.150 I 0.333
Solyc02g072000.2 Solanum lycopersicum Solyc02g072000.2 I 0.333
PGSC0003DMG400028414 Solanum tuberosum PGSC0003DMG400028414 I 0.333
Bra011735 Brassica rapa Bra011735 I 0.333
GRMZM2G118453 Zea mays GRMZM2G118453 I 0.333
HSF4 Populus trichocarpa POPTR_0007s11030 I 0.333
Thhalv10003411m.g Eutrema salsugineum Thhalv10003411m.g I 0.333
Bra025608 Brassica rapa Bra025608 I 0.333
OB03G40890 Oryza brachyantha OB03G40890 I 0.332
OPUNC03G31000 Oryza punctata OPUNC03G31000 I 0.332
Bra032023 Brassica rapa Bra032023 I 0.332
Gorai.012G044200 Gossypium raimondii Gorai.012G044200 I 0.332
Gorai.008G244400 Gossypium raimondii Gorai.008G244400 I 0.332
Aquca_039_00029 Aquilegia coerulea Aquca_039_00029 I 0.332
evm.TU.supercontig_50.58 Carica papaya evm.TU.supercontig_50.58 I 0.331
Lus10040911.g Linum usitatissimum Lus10040911.g I 0.331
ORGLA03G0308600 Oryza glaberrima ORGLA03G0308600 I 0.331
ORUFI03G35260 Oryza rufipogon ORUFI03G35260 I 0.331
Sb03g034630 Sorghum bicolor Sb03g034630 I 0.331
BGIOSGA009826 Oryza indica BGIOSGA009826 I 0.331
OGLUM03G33530 Oryza glumaepatula OGLUM03G33530 I 0.331
OBART03G33860 Oryza barthii OBART03G33860 I 0.331
HSF4 Vitis vinifera VIT_07s0031g00670 I 0.331
F775_11681 Aegilops tauschii F775_11681 I 0.330
estExt_Genewise1.C_310312 Physcomitrella patens estExt_Genewise1.C_310312 I 0.330
OB01G39790 Oryza brachyantha OB01G39790 I 0.330
cassava13765.valid.m1 Manihot esculenta cassava13765.valid.m1 I 0.330
Bra017595 Brassica rapa Bra017595 I 0.330
Traes_5DL_431CCA490 Triticum aestivum Traes_5DL_431CCA490 I 0.330
Gorai.N013300 Gossypium raimondii Gorai.N013300 I 0.330
Cucsa.212820 Cucumis sativus Cucsa.212820 I 0.330
Bo9g062710 Brassica oleracea Bo9g062710 I 0.330
ONIVA03G35150 Oryza nivara ONIVA03G35150 I 0.330
Cagra.0914s0008 Capsella grandiflora Cagra.0914s0008 I 0.329
Bra001071 Brassica rapa Bra001071 I 0.329
Bra022949 Brassica rapa Bra022949 I 0.329
Carubv10023839m.g Capsella rubella Carubv10023839m.g I 0.329
GSMUA_Achr4G04500_001 Musa acuminata GSMUA_Achr4G04500_001 I 0.329
TCM_011279 Theobroma cacao TCM_011279 I 0.329
Pavir.Eb03132 Panicum virgatum Pavir.Eb03132 I 0.329
GSMUA_Achr6G31750_001 Musa acuminata GSMUA_Achr6G31750_001 I 0.329
Si001439m.g Setaria italica Si001439m.g I 0.329
OPUNC01G15930 Oryza punctata OPUNC01G15930 I 0.329
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.328
Bra030341 Brassica rapa Bra030341 I 0.328
AT4G19630 Arabidopsis thaliana AT4G19630 N 0.328
Pavir.Ba01265 Panicum virgatum Pavir.Ba01265 I 0.327
Bo2g165540 Brassica oleracea Bo2g165540 I 0.327
AT-HSFA4C Arabidopsis lyrata fgenesh2_kg.8__230__AT5G45710.1 I 0.327
GSMUA_Achr3G15640_001 Musa acuminata GSMUA_Achr3G15640_001 I 0.327
Bra000235 Brassica rapa Bra000235 I 0.326
Cagra.3356s0067 Capsella grandiflora Cagra.3356s0067 I 0.326
Bo4g139270 Brassica oleracea Bo4g139270 N 0.326
TRIUR3_31165 Triticum urartu TRIUR3_31165 I 0.326
Gorai.011G105700 Gossypium raimondii Gorai.011G105700 I 0.326
Cla000728 Citrullus lanatus Cla000728 I 0.326
Carubv10004840m.g Capsella rubella Carubv10004840m.g I 0.326
OMERI03G31070 Oryza meridionalis OMERI03G31070 I 0.326
F775_19430 Aegilops tauschii F775_19430 I 0.326
gw1.42.207.1 Physcomitrella patens gw1.42.207.1 I 0.325
GRMZM2G115456 Zea mays GRMZM2G115456 I 0.325
scaffold_201202.1 Arabidopsis lyrata scaffold_201202.1 I 0.325
Carubv10013628m.g Capsella rubella Carubv10013628m.g I 0.324
HSFA1E Arabidopsis thaliana AT3G02990 D 0.324
Gorai.004G257000 Gossypium raimondii Gorai.004G257000 I 0.324
Cla009875 Citrullus lanatus Cla009875 I 0.324
Bra013406 Brassica rapa Bra013406 I 0.324
LPERR01G26480 Leersia perrieri LPERR01G26480 I 0.324
ATHSFA1E Arabidopsis lyrata fgenesh2_kg.3__246__AT3G02990.1 I 0.324
MLOC_75166 Hordeum vulgare MLOC_75166 I 0.324
Bostr.8819s0096 Boechera stricta Bostr.8819s0096 I 0.324
Bostr.19046s0011 Boechera stricta Bostr.19046s0011 I 0.324
Bra023584 Brassica rapa Bra023584 I 0.324
VIT_16s0039g01840 Vitis vinifera VIT_16s0039g01840 I 0.324
AT-HSFB3 Vitis vinifera VIT_08s0007g08750 I 0.324
Cagra.1194s0002 Capsella grandiflora Cagra.1194s0002 I 0.324
scaffold_801962.1 Arabidopsis lyrata scaffold_801962.1 I 0.324
Lus10038874.g Linum usitatissimum Lus10038874.g I 0.323
SapurV1A.0182s0110 Salix purpurea SapurV1A.0182s0110 I 0.323
Ca_02416 Cicer arietinum Ca_02416 I 0.323
30190.m011156 Ricinus communis 30190.m011156 I 0.323
Eucgr.C03454 Eucalyptus grandis Eucgr.C03454 I 0.323
Ciclev10026058m.g Citrus clementina Ciclev10026058m.g I 0.323
Cagra.0796s0014 Capsella grandiflora Cagra.0796s0014 I 0.323
e_gw1.6.1274.1 Mucor circinelloides e_gw1.6.1274.1 I 0.323
Carubv10026722m.g Capsella rubella Carubv10026722m.g I 0.323
Pavir.J00582 Panicum virgatum Pavir.J00582 I 0.322
GRMZM2G098696 Zea mays GRMZM2G098696 I 0.322
SapurV1A.0037s0020 Salix purpurea SapurV1A.0037s0020 I 0.322
HSFA4C Arabidopsis thaliana AT5G45710 I 0.322
HSFB3 Arabidopsis thaliana AT2G41690 D 0.322
Bo3g055950 Brassica oleracea Bo3g055950 I 0.322
Solyc09g009100.2 Solanum lycopersicum Solyc09g009100.2 I 0.322
Cla019941 Citrullus lanatus Cla019941 I 0.322
Bo5g150300 Brassica oleracea Bo5g150300 I 0.322
gw1.24.267.1 Chlorella NC64A gw1.24.267.1 I 0.322
Cucsa.047180 Cucumis sativus Cucsa.047180 I 0.322
ONIVA01G35260 Oryza nivara ONIVA01G35260 I 0.321
ORGLA01G0253200 Oryza glaberrima ORGLA01G0253200 I 0.321
AT-HSFB3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001910 I 0.321
HSFA4B Oryza sativa OS01G0749300 I 0.321
OMERI01G28000 Oryza meridionalis OMERI01G28000 I 0.321
OBART01G30880 Oryza barthii OBART01G30880 I 0.321
OGLUM01G35030 Oryza glumaepatula OGLUM01G35030 I 0.321
Thhalv10017795m.g Eutrema salsugineum Thhalv10017795m.g I 0.321
Bo1g007320 Brassica oleracea Bo1g007320 I 0.321
chr5.CM0359.140.nc Lotus japonicus chr5.CM0359.140.nc I 0.321
PGSC0003DMG401002683 Solanum tuberosum PGSC0003DMG401002683 I 0.321
mgf014237m Mimulus guttatus mgf014237m I 0.321
Aquca_009_00974 Aquilegia coerulea Aquca_009_00974 I 0.321
BGIOSGA004459 Oryza indica BGIOSGA004459 I 0.321
Bostr.11568s0011 Boechera stricta Bostr.11568s0011 I 0.321
Eucgr.C03447 Eucalyptus grandis Eucgr.C03447 I 0.321
Bo7g118320 Brassica oleracea Bo7g118320 I 0.321
Bra017800 Brassica rapa Bra017800 I 0.321
PRUPE_ppa008441mg Prunus persica PRUPE_ppa008441mg I 0.321
Pm023788 Prunus mume Pm023788 I 0.321
mgf023919m Mimulus guttatus mgf023919m I 0.320
AMTR_s00069p00068180 Amborella trichopoda AMTR_s00069p00068180 I 0.320
GLYMA19G31940 Glycine max GLYMA19G31940 I 0.320
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.320
MDP0000156337 Malus domestica MDP0000156337 I 0.320
SapurV1A.0208s0230 Salix purpurea SapurV1A.0208s0230 I 0.319
BRADI3G42130 Brachypodium distachyon BRADI3G42130 I 0.319
BRADI4G32130 Brachypodium distachyon BRADI4G32130 I 0.319
HSFB2C Oryza sativa OS09G0526600 I 0.319
Cagra.2516s0029 Capsella grandiflora Cagra.2516s0029 N 0.319
GRMZM2G164909 Zea mays GRMZM2G164909 I 0.319
Eucgr.C03433 Eucalyptus grandis Eucgr.C03433 I 0.319
e_gw.355.83.1 Branchiostoma floridae e_gw.355.83.1 N 0.319
Cagra.3262s0012 Capsella grandiflora Cagra.3262s0012 I 0.319
e_gw.355.85.1 Branchiostoma floridae e_gw.355.85.1 N 0.319
OLONG_013342 Oryza longistaminata OLONG_013342 I 0.319
Lus10006618.g Linum usitatissimum Lus10006618.g I 0.319
M404DRAFT_161564 Pisolithus tinctorius M404DRAFT_161564 N 0.319
ML078939a Mnemiopsis leidyi ML078939a I 0.319
MLOC_57709 Hordeum vulgare MLOC_57709 I 0.319
PDK_20s1342122g001 Phoenix dactylifera PDK_20s1342122g001 I 0.318
GLYMA16G13400 Glycine max GLYMA16G13400 I 0.318
LPERR03G28330 Leersia perrieri LPERR03G28330 I 0.318
MELLADRAFT_42736 Melampsora laricipopulina MELLADRAFT_42736 I 0.318
Solyc03g026020.2 Solanum lycopersicum Solyc03g026020.2 I 0.318
Eucgr.C03440 Eucalyptus grandis Eucgr.C03440 I 0.318
Cucsa.102410 Cucumis sativus Cucsa.102410 I 0.318