CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_Chr_080012
(
Micromonas sp RCC299
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
estExt_fgenesh2_pg.C_Chr_080012
T243092_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
105904
HSF
12
102
FLRKVYSIVSNPETDDIVSWSGNGKQFTVHQLNDFSTKILPSNFNHPNFSSFVRQLNSYGFRKVEHSSWTFANPDFYEGGEDNLKKISRKT
Links
Other
HSF
family TFs
Other
Micromonas sp RCC299
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_pg.C_Chr_16000145
Micromonas sp RCC299
fgenesh2_pg.C_Chr_16000145
N
0.374
EuGene.0700010085
Micromonas sp RCC299
EuGene.0700010085
N
0.374
PAN0_006c2853
Pseudozyma antarctica
PAN0_006c2853
I
0.354
PHSY_006817
Pseudozyma hubeiensis
PHSY_006817
I
0.343
sr14344
Sporisorium reilianum
sr14344
N
0.343
PSEUBRA_SCAF7g04459
Pseudozyma brasiliensis
PSEUBRA_SCAF7g04459
I
0.342
Carubv10005408m.g
Capsella rubella
Carubv10005408m.g
I
0.331
Cagra.4909s0039
Capsella grandiflora
Cagra.4909s0039
I
0.331
SELMODRAFT_126488
Selaginella moellendorffii
SELMODRAFT_126488
I
0.327
SELMODRAFT_37324
Selaginella moellendorffii
SELMODRAFT_37324
I
0.327
Eucgr.C03433
Eucalyptus grandis
Eucgr.C03433
I
0.326
VIT_10s0003g01770
Vitis vinifera
VIT_10s0003g01770
I
0.323
HSFA7A
Arabidopsis thaliana
AT3G51910
I
0.322
UHOR_05198
Ustilago hordei
UHOR_05198
I
0.322
MTR_3g104550
Medicago truncatula
MTR_3g104550
I
0.322
GALMADRAFT_118766
Galerina marginata
GALMADRAFT_118766
I
0.322
orange1.1g015635m.g
Citrus sinensis
orange1.1g015635m.g
I
0.322
Lus10007318.g
Linum usitatissimum
Lus10007318.g
I
0.322
Eucgr.C03452
Eucalyptus grandis
Eucgr.C03452
I
0.321
Lus10029269.g
Linum usitatissimum
Lus10029269.g
I
0.320
Ca_00428
Cicer arietinum
Ca_00428
I
0.320
SapurV1A.0181s0030
Salix purpurea
SapurV1A.0181s0030
I
0.319
Ca_01640
Cicer arietinum
Ca_01640
I
0.319
Cla009875
Citrullus lanatus
Cla009875
I
0.319
Cagra.1043s0019
Capsella grandiflora
Cagra.1043s0019
I
0.318