Eucgr.D00627 (Eucalyptus grandis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Eucgr.D00627 T243116_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV

BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.384 0.512
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN

NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.384 0.512
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.359 0.512
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.359 0.512
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB

VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.349 0.512
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA

TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.349 0.512
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW

WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.345 0.465
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA

TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.345 0.465
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA

TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.333 0.453
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN

NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.333 0.453
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN

NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.331 0.453
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.330 0.477
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN

NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.325 0.442
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG

CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.325 0.442
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW

WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.325 0.442
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D00627.1 HSF 64 150

Links

Other HSF family TFs
Other Eucalyptus grandis TFs

794 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Tbx4 Mus musculus ENSMUSG00000000094 D 0.000
Aan_R011193 Calypte anna Aan_R011193 I 0.000
ENSSARG00000001033 Sorex araneus ENSSARG00000001033 I 0.000
ENSPPYG00000008798 Pongo abelii ENSPPYG00000008798 I 0.000
ENSMMUP00000012907 Macaca fascicularis ENSMMUP00000012907 I 0.000
TBX2 Oryctolagus cuniculus ENSOCUG00000023498 I 0.000
Tbx2 Rattus norvegicus ENSRNOG00000003517 I 0.000
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I 0.000
TBX2 Canis familiaris ENSCAFG00000017745 I 0.000
ENSCSAG00000005940 Chlorocebus sabaeus ENSCSAG00000005940 I 0.000
SMRZ_0000901601 Schistosoma margrebowiei SMRZ_0000901601 I 0.000
SCUD_0001668701 Schistosoma curassoni SCUD_0001668701 I 0.000
TBX2 Gorilla gorilla ENSGGOG00000009144 I 0.000
TBX5 Callithrix jacchus ENSCJAG00000009744 I 0.000
TBX2 Callithrix jacchus ENSCJAG00000001256 I 0.000
Aan_R007630 Calypte anna Aan_R007630 N 0.000
RPRC001899 Rhodnius prolixus RPRC001899 N 0.000
Afo_R015481 Aptenodytes forsteri Afo_R015481 N 0.000
DILT_0000604501 Diphyllobothrium latum DILT_0000604501 N 0.000
ENSBTAP00000018970-D1 Bos grunniens ENSBTAP00000018970-D1 N 0.000
SSLN_0000647101 Schistocephalus solidus SSLN_0000647101 N 0.000
NBR_0001696801 Nippostrongylus brasiliensis NBR_0001696801 N 0.000
Myotis_brandtii_T_10014749 Myotis brandtii Myotis_brandtii_T_10014749 N 0.000
CLEC004947 Cimex lectularius CLEC004947 N 0.000
A_02404 Schistosoma haematobium A_02404 N 0.000
PHUM322730 Pediculus humanus PHUM322730 N 0.000
ISCW019283 Ixodes scapularis ISCW019283 N 0.000
ENSFALG00000012218 Ficedula albicollis ENSFALG00000012218 N 0.000
TBX2 Felis catus ENSFCAG00000008993 N 0.000
ENSLACG00000002795 Latimeria chalumnae ENSLACG00000002795 N 0.000
ENSLACG00000008854 Latimeria chalumnae ENSLACG00000008854 N 0.000
ENSMGAG00000011118 Meleagris gallopavo ENSMGAG00000011118 N 0.000
T Myotis lucifugus ENSMLUG00000011294 N 0.000
ENSMPUG00000006418 Mustela putorius furo ENSMPUG00000006418 N 0.000
ENSPFOG00000021683 Poecilia formosa ENSPFOG00000021683 N 0.000
ENSPSIG00000006299 Pelodiscus sinensis ENSPSIG00000006299 N 0.000
ENSOARG00000016407 Ovis aries ENSOARG00000016407 N 0.000
HelroG77782 Helobdella robusta HelroG77782 N 0.000
HelroG89689 Helobdella robusta HelroG89689 N 0.000
ISCW019280 Ixodes scapularis ISCW019280 N 0.000
TBX5 Erinaceus europaeus ENSEEUG00000013203 N 0.000