Gorai.003G160600 (Gossypium raimondii)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Gorai.003G160600 T243172_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.545 0.908
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.545 0.908
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB

VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.474 0.793
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA

TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.474 0.793
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.462 0.793
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV

BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.438 0.644
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN

NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.438 0.644
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN

NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.408 0.632
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN

NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.406 0.644
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG

CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.406 0.644
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW

WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.406 0.644
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA

TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.402 0.678
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.402 0.678
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA

TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.382 0.667
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG

CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.382 0.667
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA

TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.377 0.644
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN

NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.377 0.644
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW

WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.370 0.586
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA

TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.370 0.586
HSF1
M03329_2.00
Homo sapiens
GAANVTTCBVGAA

TTCBVGAABNTTC
SELEX
Jolma et al.(2013)
HSF1_1
0.344 0.552
HSF1
M03330_2.00
Homo sapiens
GAANRTTCBAGAA

TTCTVGAAYNTTC
SELEX
Jolma et al.(2013)
HSF1_2
0.344 0.552
HSF1
M05523_2.00
Homo sapiens
VGAABVTTCBVGAWN

NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX
0.344 0.552
HSF1
M05525_2.00
Homo sapiens
VGAANRTTCKVGAAN

NTTCBMGAAYNTTCB
SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX
0.344 0.552
HSF1
M07977_2.00
Homo sapiens
GDCSYGGGTTCRADYCCC

GGGRHTYGAACCCRSGHC
ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford
0.344 0.552
HSF1
M09230_2.00
Homo sapiens
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A
0.344 0.552
Hsf1
M09232_2.00
Mus musculus
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A
0.344 0.552
HSF1
M09592_2.00
Homo sapiens
NNBBCYRGAANNTTCYRGVV

BBCYRGAANNTTCYRGVVNN
Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477
0.344 0.552
Hsf1
M09593_2.00
Mus musculus
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000
0.344 0.552
HSF1
M10863_2.00
Homo sapiens
NGAAHNTTCY

RGAANDTTCN
Transfac
Matys et al.(2006)
V$HSF1_01
0.344 0.552
HSF1
M10864_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5_01
0.344 0.552
HSF1
M10865_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5
0.344 0.552
HSF1
M10866_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6_01
0.344 0.552
HSF1
M10867_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6
0.344 0.552
HSF1
M10868_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF_Q6
0.344 0.552
HSF1
M05524_2.00
Homo sapiens
RGAANRTTCYRGAWN

NWTCYRGAAYNTTCY
SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX
0.344 0.552
HSF1
M05526_2.00
Homo sapiens
RGAANVTTCYRGAWN

NWTCYRGAABNTTCY
SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX
0.344 0.552
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G160600.1 HSF 29 119
Gorai.003G160600.2 HSF 29 119

Links

Other HSF family TFs
Other Gossypium raimondii TFs

1497 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DZIP1 Pteropus vampyrus ENSPVAG00000004728 N 0.000
DZIP1 Myotis lucifugus ENSMLUG00000009732 N 0.000
DZIP1 Macaca mulatta ENSMMUG00000005839 N 0.000
DZIP1 Vicugna pacos ENSVPAG00000007605 N 0.000
Dzip1 Mus musculus ENSMUSG00000042156 N 0.000
DZIP1 Tursiops truncatus ENSTTRG00000015452 N 0.000
DZIP1 Oryctolagus cuniculus ENSOCUG00000009441 N 0.000
DZIP1 Otolemur garnettii ENSOGAG00000004464 N 0.000
DZIP1 Ochotona princeps ENSOPRG00000017358 N 0.000
DZIP1 Sus scrofa ENSSSCG00000009501 N 0.000
Dzip1 Rattus norvegicus ENSRNOG00000010311 N 0.000
DZIP1 Pan troglodytes ENSPTRG00000005974 N 0.000
DZIP1 Loxodonta africana ENSLAFG00000008646 N 0.000
DZIP1 Gorilla gorilla ENSGGOG00000016859 N 0.000
DZIP1 Bos taurus ENSBTAG00000003569 N 0.000
DZIP1 Canis familiaris ENSCAFG00000005465 N 0.000
DZIP1 Dasypus novemcinctus ENSDNOG00000015097 N 0.000
DZIP1 Equus caballus ENSECAG00000021423 N 0.000
DZIP1 Echinops telfairi ENSETEG00000005417 N 0.000
DZIP1 Felis catus ENSFCAG00000002928 N 0.000
DZIP1 Homo sapiens ENSG00000134874 N 0.000
ENSAMEG00000010296 Ailuropoda melanoleuca ENSAMEG00000010296 N 0.000
ENSCJAG00000003362 Callithrix jacchus ENSCJAG00000003362 N 0.000
ENSCJAG00000012492 Callithrix jacchus ENSCJAG00000012492 N 0.000
ENSCSAG00000017526 Chlorocebus sabaeus ENSCSAG00000017526 N 0.000
ENSDORG00000011639 Dipodomys ordii ENSDORG00000011639 N 0.000
ENSMICG00000011959 Microcebus murinus ENSMICG00000011959 N 0.000
ENSMPUG00000011789 Mustela putorius furo ENSMPUG00000011789 N 0.000
ENSOARG00000002096 Ovis aries ENSOARG00000002096 N 0.000
ENSP00000366025 Macaca fascicularis ENSP00000366025 N 0.000
ENSP00000366025-D1 Bos grunniens ENSP00000366025-D1 N 0.000
ENSPANG00000014288 Papio anubis ENSPANG00000014288 N 0.000
ENSPPYG00000005450 Pongo abelii ENSPPYG00000005450 N 0.000
Myotis_brandtii_DZIP1_10030214 Myotis brandtii Myotis_brandtii_DZIP1_10030214 N 0.000