MDP0000209135 (Malus domestica)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 MDP0000209135 T243269_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.581 0.977
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.458 0.782
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.458 0.782
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN

NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.452 0.678
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB

VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.442 0.701
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA

TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.442 0.701
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN

NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.428 0.632
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG

CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.428 0.632
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW

WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.428 0.632
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV

BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.419 0.644
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN

NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.419 0.644
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA

TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.418 0.678
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.418 0.678
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW

WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.417 0.667
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA

TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.417 0.667
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA

TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.405 0.678
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN

NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.405 0.678
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA

TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.397 0.678
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG

CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.397 0.678
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000209135 HSF 25 115

Links

Other HSF family TFs
Other Malus domestica TFs

1437 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Atf4 Mus musculus ENSMUSG00000042406 D 0.000
ATF4 Homo sapiens ENSG00000128272 D 0.000
Atf4 Rattus norvegicus ENSRNOG00000017801 I 0.000
ENSSHAG00000014069 Sarcophilus harrisii ENSSHAG00000014069 I 0.000
ATF4 Sus scrofa ENSSSCG00000000084 I 0.000
ENSSTOG00000024459 Ictidomys tridecemlineatus ENSSTOG00000024459 I 0.000
ENSSTOG00000025355 Ictidomys tridecemlineatus ENSSTOG00000025355 I 0.000
ENSSTOG00000025644 Ictidomys tridecemlineatus ENSSTOG00000025644 I 0.000
ATF4 Tupaia belangeri ENSTBEG00000005052 I 0.000
ATF4 Pteropus vampyrus ENSPVAG00000015476 I 0.000
ATF4 Ochotona princeps ENSOPRG00000010583 I 0.000
ENSPSIG00000011085 Pelodiscus sinensis ENSPSIG00000011085 I 0.000
atf4a Oryzias latipes ENSORLG00000010649 I 0.000
ATF4 Oryzias latipes ENSORLG00000013424 I 0.000
ENSPANG00000025194 Papio anubis ENSPANG00000025194 I 0.000
ATF4 Procavia capensis ENSPCAG00000004089 I 0.000
ATF4 Pan troglodytes ENSPTRG00000014398 I 0.000
ENSPFOG00000005452 Poecilia formosa ENSPFOG00000005452 I 0.000
ENSPFOG00000006088 Poecilia formosa ENSPFOG00000006088 I 0.000
ENSPPYG00000011842 Pongo abelii ENSPPYG00000011842 I 0.000
ATF4 Taeniopygia guttata ENSTGUG00000010225 I 0.000
atf4a Tetraodon nigroviridis ENSTNIG00000000373 I 0.000
ENSP00000384587 Macaca fascicularis ENSP00000384587 I 0.000
Gfo_R004722 Geospiza fortis Gfo_R004722 I 0.000
Myotis_brandtii_ATF4_10014009 Myotis brandtii Myotis_brandtii_ATF4_10014009 I 0.000
Ogr14426 Ophisaurus gracilis Ogr14426 I 0.000
Pvit_04694 Pogona vitticeps Pvit_04694 I 0.000
Tal_R009484 Tyto alba Tal_R009484 I 0.000
atf4.S Xenopus laevis XB-GENE-6251859 I 0.000
atf4 Xenopus tropicalis XB-GENE-983841 I 0.000
ENSBTAP00000023213-D1 Bos grunniens ENSBTAP00000023213-D1 I 0.000
Cmyd_10007892 Chelonia mydas Cmyd_10007892 I 0.000
atf4a Takifugu rubripes ENSTRUG00000001898 I 0.000
ATF4 Tursiops truncatus ENSTTRG00000014581 I 0.000
ENSXMAG00000002653 Xiphophorus maculatus ENSXMAG00000002653 I 0.000
ENSXMAG00000008039 Xiphophorus maculatus ENSXMAG00000008039 I 0.000
Aan_R011605 Calypte anna Aan_R011605 I 0.000
Afo_R007931 Aptenodytes forsteri Afo_R007931 I 0.000
Alligator_sinensis_CCG008004.1 Alligator sinensis Alligator_sinensis_CCG008004.1 I 0.000
Brh_R011254 Buceros rhinoceros Brh_R011254 I 0.000
atf4.L Xenopus laevis XB-GENE-983847 I 0.000
ENSONIG00000013091 Oreochromis niloticus ENSONIG00000013091 I 0.000
ENSONIG00000008552 Oreochromis niloticus ENSONIG00000008552 I 0.000
atf4a Gasterosteus aculeatus ENSGACG00000019842 I 0.000
ATF4 Felis catus ENSFCAG00000009288 I 0.000
ENSFALG00000012313 Ficedula albicollis ENSFALG00000012313 I 0.000
ATF4 Equus caballus ENSECAG00000006931 I 0.000
Atf4 Dipodomys ordii ENSDORG00000004952 I 0.000
ENSDNOG00000046837 Dasypus novemcinctus ENSDNOG00000046837 I 0.000
ENSDNOG00000030854 Dasypus novemcinctus ENSDNOG00000030854 I 0.000
atf4a Danio rerio ENSDARG00000039515 I 0.000
atf4b Danio rerio ENSDARG00000038141 I 0.000
ENSCSAG00000006330 Chlorocebus sabaeus ENSCSAG00000006330 I 0.000
ATF4 Cavia porcellus ENSCPOG00000022485 I 0.000
ATF4 Callithrix jacchus ENSCJAG00000002594 I 0.000
ATF4 Choloepus hoffmanni ENSCHOG00000008739 I 0.000
ATF4 Canis familiaris ENSCAFG00000001324 I 0.000
ATF4 Bos taurus ENSBTAG00000017462 I 0.000
ENSAPLG00000001773 Anas platyrhynchos ENSAPLG00000001773 I 0.000
ENSAMXG00000011467 Astyanax mexicanus ENSAMXG00000011467 I 0.000
ATF4 Gallus gallus ENSGALG00000012135 I 0.000
ENSGGOG00000010115 Gorilla gorilla ENSGGOG00000010115 I 0.000
ENSGGOG00000024022 Gorilla gorilla ENSGGOG00000024022 I 0.000
ATF4 Otolemur garnettii ENSOGAG00000033566 I 0.000
ENSOARG00000016775 Ovis aries ENSOARG00000016775 I 0.000
ATF4 Ornithorhynchus anatinus ENSOANG00000011026 I 0.000
ENSNLEG00000015257 Nomascus leucogenys ENSNLEG00000015257 I 0.000
ENSMPUG00000013386 Mustela putorius furo ENSMPUG00000013386 I 0.000
ENSMPUG00000009865 Mustela putorius furo ENSMPUG00000009865 I 0.000
ATF4 Monodelphis domestica ENSMODG00000009380 I 0.000
ENSMMUG00000004499 Macaca mulatta ENSMMUG00000004499 I 0.000
ENSMLUG00000027798 Myotis lucifugus ENSMLUG00000027798 I 0.000
ENSMICG00000011448 Microcebus murinus ENSMICG00000011448 I 0.000
ATF4 Meleagris gallopavo ENSMGAG00000012387 I 0.000
ENSMEUG00000011209 Macropus eugenii ENSMEUG00000011209 I 0.000
ENSLOCG00000011103 Lepisosteus oculatus ENSLOCG00000011103 I 0.000
ATF4 Loxodonta africana ENSLAFG00000012020 I 0.000
ENSLACG00000003943 Latimeria chalumnae ENSLACG00000003943 I 0.000
ENSGMOG00000018039 Gadus morhua ENSGMOG00000018039 I 0.000
ENSGMOG00000014904 Gadus morhua ENSGMOG00000014904 I 0.000
ATF4 Anolis carolinensis ENSACAG00000007573 I 0.000