Thhalv10012073m.g (Eutrema salsugineum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Thhalv10012073m.g T243415_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFY2
M03326_2.00
Homo sapiens
WTCGAWNVRWTCGAW

WTCGAWYBNWTCGAW
SELEX
Jolma et al.(2013)
HSFY2_1
0.345 0.303
HSFY2
M03327_2.00
Homo sapiens
CRTTCGAWW

WWTCGAAYG
SELEX
Jolma et al.(2013)
HSFY2_2
0.345 0.303
HSFY2
M03328_2.00
Homo sapiens
DTCGAAHSNWTCGAW

WTCGAWNSDTTCGAH
SELEX
Jolma et al.(2013)
HSFY2_3
0.345 0.303
HSFY1
M05515_2.00
Homo sapiens
NDTVGAAYGWTTCGAAYGB

VCRTTCGAAWCRTTCBAHN
SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_1
0.345 0.303
HSFY1
M05516_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_2
0.345 0.303
HSFY2
M05511_2.00
Homo sapiens
NDTVGAAYGWTTCGAAYGB

VCRTTCGAAWCRTTCBAHN
SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_1
0.345 0.303
HSFY2
M05512_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_2
0.345 0.303
HSFY1
M05517_2.00
Homo sapiens
NDTRGAATGTTTRGAATGB

VCATTCYAAACATTCYAHN
SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_1
0.345 0.303
HSFY1
M05518_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_2
0.345 0.303
HSFY2
M05513_2.00
Homo sapiens
NDWRGAAYGTTTRGAAYGB

VCRTTCYAAACRTTCYWHN
SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_1
0.345 0.303
HSFY2
M05514_2.00
Homo sapiens
DTTCGAAHSDTTCGAAH

DTTCGAAHSDTTCGAAH
SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_2
0.345 0.303
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10012073m HSF 12 104

Links

Other HSF family TFs
Other Eutrema salsugineum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HSFY1 Homo sapiens ENSG00000172468 D 0.345
HSFY2 Homo sapiens ENSG00000169953 D 0.345
SapurV1A.3884s0010 Salix purpurea SapurV1A.3884s0010 I 0.320
WALSEDRAFT_67781 Wallemia sebi WALSEDRAFT_67781 I 0.319
TriadG23376 Trichoplax adhaerens TriadG23376 I 0.325
hsf1 Schizosaccharomyces pombe SPAC2E12.02 I 0.320
SCLCIDRAFT_1218516 Scleroderma citrinum SCLCIDRAFT_1218516 I 0.341
scaffold_702717.1 Arabidopsis lyrata scaffold_702717.1 I 0.330
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.346
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.362
estExt_fgenesh1_pg.C_30124 Sporobolomyces roseus estExt_fgenesh1_pg.C_30124 I 0.341
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.323
Thhalv10003411m.g Eutrema salsugineum Thhalv10003411m.g I 0.326
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.343
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.350
Cagra.3262s0012 Capsella grandiflora Cagra.3262s0012 I 0.358
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.365
Carubv10006025m.g Capsella rubella Carubv10006025m.g I 0.350
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.352
SapurV1A.0029s0230 Salix purpurea SapurV1A.0029s0230 I 0.320
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.318
NEMVEDRAFT_v1g86916 Nematostella vectensis NEMVEDRAFT_v1g86916 I 0.339
KLLA0_D03322g Kluyveromyces lactis KLLA0_D03322g I 0.323
ENSMODG00000028107 Monodelphis domestica ENSMODG00000028107 I 0.330
ENSMLUG00000024907 Myotis lucifugus ENSMLUG00000024907 I 0.323
ENSCSAG00000018308 Chlorocebus sabaeus ENSCSAG00000018308 I 0.325
ENSCAFG00000029639 Canis familiaris ENSCAFG00000029639 I 0.321
ENSCAFG00000023067 Canis familiaris ENSCAFG00000023067 I 0.321
Bra030341 Brassica rapa Bra030341 I 0.333
Al_scaffold_0003_3814 Arabidopsis lyrata Al_scaffold_0003_3814 I 0.503
AGOS_AFL085C Ashbya gossypii AGOS_AFL085C I 0.318
AACERI_AaceriAFL085C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL085C I 0.321
Hsfy2 Mus musculus ENSMUSG00000045336 I 0.342
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I 0.342
J056_002394 Wallemia ichthyophaga J056_002394 I 0.332
Afo_R012751 Aptenodytes forsteri Afo_R012751 I 0.325
ENSOANG00000001091 Ornithorhynchus anatinus ENSOANG00000001091 I 0.332
ENSOANG00000012192 Ornithorhynchus anatinus ENSOANG00000012192 I 0.340
ENSOANG00000028803 Ornithorhynchus anatinus ENSOANG00000028803 I 0.321
FIBRA_02011 Fibroporia radiculosa FIBRA_02011 I 0.338
Carubv10014950m.g Capsella rubella Carubv10014950m.g N 0.365
AT4G19630 Arabidopsis thaliana AT4G19630 N 0.364
scaffold_702446.1 Arabidopsis lyrata scaffold_702446.1 N 0.343
e_gw.355.85.1 Branchiostoma floridae e_gw.355.85.1 N 0.321
Cagra.2516s0029 Capsella grandiflora Cagra.2516s0029 N 0.362
H311_04477 Anncaliia algerae H311_04477 N 0.338
e_gw.355.83.1 Branchiostoma floridae e_gw.355.83.1 N 0.321
Bostr.27895s0020 Boechera stricta Bostr.27895s0020 N 0.377