Thhalv10028026m.g (Eutrema salsugineum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Thhalv10028026m.g T243431_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.340 0.471
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.321 0.435
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.321 0.435
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10028026m HSF 12 102

Links

Other HSF family TFs
Other Eutrema salsugineum TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_702873.1 Arabidopsis lyrata scaffold_702873.1 I 0.399
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.377
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.372
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.364
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.364
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.364
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.363
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.362
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.361
Carubv10006025m.g Capsella rubella Carubv10006025m.g I 0.361
Bra025606 Brassica rapa Bra025606 I 0.360
GLYMA15G09280 Glycine max GLYMA15G09280 I 0.359
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.358
Bo4g139200 Brassica oleracea Bo4g139200 I 0.357
Ciclev10015472m.g Citrus clementina Ciclev10015472m.g I 0.356
30026.m001484 Ricinus communis 30026.m001484 I 0.355
Aquca_039_00029 Aquilegia coerulea Aquca_039_00029 I 0.354
Bra025608 Brassica rapa Bra025608 I 0.352
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.351
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.349
POPTR_0010s11490 Populus trichocarpa POPTR_0010s11490 I 0.348
Bra025635 Brassica rapa Bra025635 I 0.348
Gorai.011G168400 Gossypium raimondii Gorai.011G168400 I 0.347
Bo4g139630 Brassica oleracea Bo4g139630 I 0.346
scaffold_702446.1 Arabidopsis lyrata scaffold_702446.1 N 0.345
Lus10029269.g Linum usitatissimum Lus10029269.g I 0.344
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.344
GSMUA_Achr6G31750_001 Musa acuminata GSMUA_Achr6G31750_001 I 0.343
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.342
Cagra.13025s0006 Capsella grandiflora Cagra.13025s0006 I 0.342
Thhalv10028027m.g Eutrema salsugineum Thhalv10028027m.g I 0.341
Bo1g020010 Brassica oleracea Bo1g020010 I 0.341
BRADI2G44050 Brachypodium distachyon BRADI2G44050 I 0.341
Bra023584 Brassica rapa Bra023584 I 0.341
PK02428.1 Cannabis sativa PK02428.1 I 0.340
HSFA4A Arabidopsis thaliana AT4G18880 D 0.340
GSMUA_Achr3G15640_001 Musa acuminata GSMUA_Achr3G15640_001 I 0.340
Carubv10007409m.g Capsella rubella Carubv10007409m.g I 0.340
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.340
Bo7g106320 Brassica oleracea Bo7g106320 I 0.340
Bra012571 Brassica rapa Bra012571 I 0.340
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.340
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.340
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.340
Bra013358 Brassica rapa Bra013358 I 0.340
Carubv10007333m.g Capsella rubella Carubv10007333m.g I 0.339
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I 0.339
Eucgr.I00929 Eucalyptus grandis Eucgr.I00929 I 0.339
GLYMA01G39260 Glycine max GLYMA01G39260 I 0.339
GLYMA11G06010 Glycine max GLYMA11G06010 I 0.339
OB03G40890 Oryza brachyantha OB03G40890 I 0.338
OPUNC03G31000 Oryza punctata OPUNC03G31000 I 0.338
PGSC0003DMG400006447 Solanum tuberosum PGSC0003DMG400006447 I 0.338
orange1.1g015635m.g Citrus sinensis orange1.1g015635m.g I 0.337
PDK_20s1342122g001 Phoenix dactylifera PDK_20s1342122g001 I 0.337
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.336
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.336
Si022026m.g Setaria italica Si022026m.g I 0.336
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.336
ORGLA03G0308600 Oryza glaberrima ORGLA03G0308600 I 0.336
TCM_029630 Theobroma cacao TCM_029630 I 0.336
29968.m000635 Ricinus communis 29968.m000635 I 0.336
Pavir.Ca01519 Panicum virgatum Pavir.Ca01519 I 0.336
ORUFI03G35260 Oryza rufipogon ORUFI03G35260 I 0.336
OGLUM03G33530 Oryza glumaepatula OGLUM03G33530 I 0.336
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.336
Gorai.008G170800 Gossypium raimondii Gorai.008G170800 I 0.336
Gorai.010G240800 Gossypium raimondii Gorai.010G240800 I 0.336
OBART03G33860 Oryza barthii OBART03G33860 I 0.336
Cagra.3262s0012 Capsella grandiflora Cagra.3262s0012 I 0.336
BGIOSGA009826 Oryza indica BGIOSGA009826 I 0.336
evm.TU.supercontig_50.58 Carica papaya evm.TU.supercontig_50.58 I 0.335
ONIVA03G35150 Oryza nivara ONIVA03G35150 I 0.335
GSMUA_Achr4G04500_001 Musa acuminata GSMUA_Achr4G04500_001 I 0.335
SapurV1A.0053s0820 Salix purpurea SapurV1A.0053s0820 I 0.335
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.334
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.334
Sb09g026440 Sorghum bicolor Sb09g026440 I 0.334
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.334
AC205471.4_FG003 Zea mays AC205471.4_FG003 I 0.334
Bo3g157380 Brassica oleracea Bo3g157380 I 0.333
mgf006143m Mimulus guttatus mgf006143m I 0.333
Bra025611 Brassica rapa Bra025611 N 0.333
F775_21225 Aegilops tauschii F775_21225 I 0.333
Bra023800 Brassica rapa Bra023800 I 0.333
BRADI2G18980 Brachypodium distachyon BRADI2G18980 I 0.333
Pavir.J00582 Panicum virgatum Pavir.J00582 I 0.332
MDP0000126826 Malus domestica MDP0000126826 I 0.332
Gorai.003G053300 Gossypium raimondii Gorai.003G053300 I 0.332
PRUPE_ppa015468mg Prunus persica PRUPE_ppa015468mg I 0.332
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.332
orange1.1g015162m.g Citrus sinensis orange1.1g015162m.g I 0.332
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.332
TRAES3BF021000010CFD_g Triticum aestivum TRAES3BF021000010CFD_g I 0.332
SELMODRAFT_110881 Selaginella moellendorffii SELMODRAFT_110881 I 0.332
TRIUR3_34250 Triticum urartu TRIUR3_34250 I 0.332
SELMODRAFT_107503 Selaginella moellendorffii SELMODRAFT_107503 I 0.332
Pm013905 Prunus mume Pm013905 I 0.332
Solyc07g055710.2 Solanum lycopersicum Solyc07g055710.2 I 0.332
BRADI4G32130 Brachypodium distachyon BRADI4G32130 I 0.332
F775_02744 Aegilops tauschii F775_02744 I 0.332
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.332
MLOC_57709 Hordeum vulgare MLOC_57709 I 0.332
OB05G31230 Oryza brachyantha OB05G31230 I 0.332
OGLUM05G25010 Oryza glumaepatula OGLUM05G25010 I 0.331
OPUNC05G21050 Oryza punctata OPUNC05G21050 I 0.331
cassava13765.valid.m1 Manihot esculenta cassava13765.valid.m1 I 0.331
ONIVA05G24200 Oryza nivara ONIVA05G24200 I 0.331
OMERI05G21150 Oryza meridionalis OMERI05G21150 I 0.331
LPERR05G19500 Leersia perrieri LPERR05G19500 I 0.331
Eucgr.H03412 Eucalyptus grandis Eucgr.H03412 I 0.331
SapurV1A.0055s0270 Salix purpurea SapurV1A.0055s0270 I 0.331
BGIOSGA020240 Oryza indica BGIOSGA020240 I 0.331
PK09831.1 Cannabis sativa PK09831.1 I 0.331
Bo4g139270 Brassica oleracea Bo4g139270 N 0.331
Bra002882 Brassica rapa Bra002882 I 0.331
ORUFI05G25150 Oryza rufipogon ORUFI05G25150 I 0.331
orange1.1g016378m.g Citrus sinensis orange1.1g016378m.g I 0.331
Ciclev10015541m.g Citrus clementina Ciclev10015541m.g I 0.331
OBART05G23630 Oryza barthii OBART05G23630 I 0.331
HSFA4D Oryza sativa OS05G0530400 I 0.331
MLOC_11453 Hordeum vulgare MLOC_11453 I 0.330
Cla019941 Citrullus lanatus Cla019941 I 0.330
OMERI03G31070 Oryza meridionalis OMERI03G31070 I 0.330
HSF4 Populus trichocarpa POPTR_0007s11030 I 0.330
TCM_001784 Theobroma cacao TCM_001784 I 0.330
Gorai.006G125000 Gossypium raimondii Gorai.006G125000 I 0.329
Gorai.006G242400 Gossypium raimondii Gorai.006G242400 I 0.329
Ca_08627 Cicer arietinum Ca_08627 I 0.329
Ca_09277 Cicer arietinum Ca_09277 I 0.329
SapurV1A.0015s0620 Salix purpurea SapurV1A.0015s0620 I 0.328
Cucsa.139730 Cucumis sativus Cucsa.139730 I 0.328
MLOC_51191 Hordeum vulgare MLOC_51191 I 0.328
Cucsa.212820 Cucumis sativus Cucsa.212820 I 0.328
Bostr.27895s0020 Boechera stricta Bostr.27895s0020 N 0.328
MDP0000155667 Malus domestica MDP0000155667 I 0.328
Ciclev10015413m.g Citrus clementina Ciclev10015413m.g I 0.328
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.328
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.328
POPTR_0006s11680 Populus trichocarpa POPTR_0006s11680 I 0.327
GRMZM2G086880 Zea mays GRMZM2G086880 I 0.327
scaffold_702507.1 Arabidopsis lyrata scaffold_702507.1 N 0.327
Ca_00428 Cicer arietinum Ca_00428 I 0.327
TCM_020700 Theobroma cacao TCM_020700 I 0.327
TRIUR3_26103 Triticum urartu TRIUR3_26103 I 0.327
SapurV1A.0238s0150 Salix purpurea SapurV1A.0238s0150 I 0.327
POPTR_0010s09210 Populus trichocarpa POPTR_0010s09210 I 0.327
Cla013713 Citrullus lanatus Cla013713 I 0.327
orange1.1g011077m.g Citrus sinensis orange1.1g011077m.g I 0.327
SapurV1A.3703s0010 Salix purpurea SapurV1A.3703s0010 I 0.327
evm.TU.supercontig_55.150 Carica papaya evm.TU.supercontig_55.150 I 0.326
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.326
Cucsa.254620 Cucumis sativus Cucsa.254620 I 0.326
Sb03g028470 Sorghum bicolor Sb03g028470 I 0.326
TRIUR3_25943 Triticum urartu TRIUR3_25943 I 0.326
TRAES3BF071100100CFD_g Triticum aestivum TRAES3BF071100100CFD_g I 0.326
SapurV1A.0181s0030 Salix purpurea SapurV1A.0181s0030 I 0.326
Cla021920 Citrullus lanatus Cla021920 I 0.326
evm.TU.supercontig_44.122 Carica papaya evm.TU.supercontig_44.122 I 0.326
Lus10009351.g Linum usitatissimum Lus10009351.g I 0.326
GRMZM2G115456 Zea mays GRMZM2G115456 I 0.326
Gorai.011G105700 Gossypium raimondii Gorai.011G105700 I 0.325
OBART09G12750 Oryza barthii OBART09G12750 I 0.325
PGSC0003DMG401027812 Solanum tuberosum PGSC0003DMG401027812 I 0.325
MDP0000155579 Malus domestica MDP0000155579 I 0.325
LPERR09G09190 Leersia perrieri LPERR09G09190 I 0.325
PGSC0003DMG400017334 Solanum tuberosum PGSC0003DMG400017334 I 0.325
LPERR03G28330 Leersia perrieri LPERR03G28330 I 0.325
OMERI09G10160 Oryza meridionalis OMERI09G10160 I 0.325
Pm010169 Prunus mume Pm010169 I 0.325
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.325
ONIVA03G20760 Oryza nivara ONIVA03G20760 I 0.325
cassava18146.valid.m1 Manihot esculenta cassava18146.valid.m1 I 0.325
HSFB1 Oryza sativa OS09G0456800 I 0.325
ORGLA09G0097500 Oryza glaberrima ORGLA09G0097500 I 0.325
OGLUM09G13200 Oryza glumaepatula OGLUM09G13200 I 0.325
ORUFI09G13720 Oryza rufipogon ORUFI09G13720 I 0.325
chr5.CM0357.390.nc Lotus japonicus chr5.CM0357.390.nc I 0.325
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.324
HSF3 Arabidopsis lyrata fgenesh2_kg.6__1675__AT5G16820.1 I 0.324
Ciclev10006902m.g Citrus clementina Ciclev10006902m.g I 0.324
POPTR_0008s13620 Populus trichocarpa POPTR_0008s13620 I 0.324
OPUNC09G11110 Oryza punctata OPUNC09G11110 I 0.324
orange1.1g018107m.g Citrus sinensis orange1.1g018107m.g I 0.324
Cagra.0434s0049 Capsella grandiflora Cagra.0434s0049 I 0.324
Carubv10003259m.g Capsella rubella Carubv10003259m.g I 0.324
Solyc03g006000.2 Solanum lycopersicum Solyc03g006000.2 I 0.323
Si036148m.g Setaria italica Si036148m.g I 0.323
Sb01g008380 Sorghum bicolor Sb01g008380 I 0.323
PK12544.1 Cannabis sativa PK12544.1 I 0.323
Lus10039376.g Linum usitatissimum Lus10039376.g I 0.323
Bra035993 Brassica rapa Bra035993 I 0.323
HSF4 Vitis vinifera VIT_07s0031g00670 I 0.323
mgf001816m Mimulus guttatus mgf001816m I 0.323
Bo1g103760 Brassica oleracea Bo1g103760 I 0.323
Gorai.007G053900 Gossypium raimondii Gorai.007G053900 I 0.322
Lus10019348.g Linum usitatissimum Lus10019348.g I 0.322
Gorai.N013300 Gossypium raimondii Gorai.N013300 I 0.322
Thhalv10013428m.g Eutrema salsugineum Thhalv10013428m.g I 0.322
POPTR_0018s05770 Populus trichocarpa POPTR_0018s05770 I 0.322
PGSC0003DMG401004023 Solanum tuberosum PGSC0003DMG401004023 I 0.322
Solyc02g090820.2 Solanum lycopersicum Solyc02g090820.2 I 0.322
GSMUA_Achr8G27750_001 Musa acuminata GSMUA_Achr8G27750_001 I 0.322
OLONG_021162 Oryza longistaminata OLONG_021162 I 0.322
gw1.24.267.1 Chlorella NC64A gw1.24.267.1 I 0.322
Cla000728 Citrullus lanatus Cla000728 I 0.322
Lus10023636.g Linum usitatissimum Lus10023636.g I 0.321
TCM_025482 Theobroma cacao TCM_025482 I 0.321
AT-HSFA6B Arabidopsis lyrata fgenesh2_kg.3__2495__AT3G22830.1 I 0.321
Carubv10004840m.g Capsella rubella Carubv10004840m.g I 0.321
Cagra.3356s0067 Capsella grandiflora Cagra.3356s0067 I 0.321
Lus10014698.g Linum usitatissimum Lus10014698.g I 0.321
POPTR_0004s06090 Populus trichocarpa POPTR_0004s06090 I 0.321
HSFA6B Arabidopsis thaliana AT3G22830 D 0.321
Carubv10013808m.g Capsella rubella Carubv10013808m.g I 0.321
Bostr.19424s0375 Boechera stricta Bostr.19424s0375 I 0.320
Pavir.Eb01618 Panicum virgatum Pavir.Eb01618 I 0.320
GRMZM2G089525 Zea mays GRMZM2G089525 I 0.320
PRUPE_ppa004559mg Prunus persica PRUPE_ppa004559mg I 0.320
Si002292m.g Setaria italica Si002292m.g I 0.320
chr4.CM0046.500.nc Lotus japonicus chr4.CM0046.500.nc I 0.320
GLYMA11G01190 Glycine max GLYMA11G01190 I 0.320
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.320
Pm011227 Prunus mume Pm011227 I 0.320
chr3.CM0127.360.nc Lotus japonicus chr3.CM0127.360.nc I 0.320
PGSC0003DMG400016270 Solanum tuberosum PGSC0003DMG400016270 I 0.320
Traes_5BL_FCB1625F3 Triticum aestivum Traes_5BL_FCB1625F3 I 0.320
HSFA3 Oryza sativa OS02G0527300 I 0.319
BGIOSGA006348 Oryza indica BGIOSGA006348 I 0.319
ORUFI02G19790 Oryza rufipogon ORUFI02G19790 I 0.319
AT4G19630 Arabidopsis thaliana AT4G19630 N 0.319
SELMODRAFT_114534 Selaginella moellendorffii SELMODRAFT_114534 I 0.319
ORGLA02G0162000 Oryza glaberrima ORGLA02G0162000 I 0.319
Eint_080950 Encephalitozoon intestinalis Eint_080950 N 0.319
Carubv10024599m.g Capsella rubella Carubv10024599m.g I 0.319
GLOINDRAFT_240353 Rhizophagus irregularis GLOINDRAFT_240353 I 0.319
OGLUM02G19090 Oryza glumaepatula OGLUM02G19090 I 0.319
OBART02G18800 Oryza barthii OBART02G18800 I 0.319
OMERI02G18820 Oryza meridionalis OMERI02G18820 I 0.319
SELMODRAFT_92634 Selaginella moellendorffii SELMODRAFT_92634 I 0.319
29844.m003222 Ricinus communis 29844.m003222 I 0.319
ONIVA02G20850 Oryza nivara ONIVA02G20850 I 0.319
Gorai.004G208800 Gossypium raimondii Gorai.004G208800 I 0.318
Solyc09g082670.2 Solanum lycopersicum Solyc09g082670.2 I 0.318
GSMUA_Achr7G13040_001 Musa acuminata GSMUA_Achr7G13040_001 I 0.318