Thhalv10028027m.g (Eutrema salsugineum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Thhalv10028027m.g T243432_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.333 0.398
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.333 0.398
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10028027m HSF 12 106

Links

Other HSF family TFs
Other Eutrema salsugineum TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g139630 Brassica oleracea Bo4g139630 I 0.423
Bra025635 Brassica rapa Bra025635 I 0.423
Bra025606 Brassica rapa Bra025606 I 0.422
Bra025608 Brassica rapa Bra025608 I 0.421
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.407
Bo4g139200 Brassica oleracea Bo4g139200 I 0.406
Bo4g139270 Brassica oleracea Bo4g139270 N 0.400
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.391
Bra025611 Brassica rapa Bra025611 N 0.386
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.371
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.370
Bra030021 Brassica rapa Bra030021 I 0.370
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.363
Carubv10006025m.g Capsella rubella Carubv10006025m.g I 0.362
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.362
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.361
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.361
scaffold_702446.1 Arabidopsis lyrata scaffold_702446.1 N 0.359
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.356
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.347
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.347
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.345
Ca_09277 Cicer arietinum Ca_09277 I 0.343
PK02428.1 Cannabis sativa PK02428.1 I 0.343
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.342
Thhalv10028026m.g Eutrema salsugineum Thhalv10028026m.g I 0.341
Bra002882 Brassica rapa Bra002882 I 0.341
Solyc02g090820.2 Solanum lycopersicum Solyc02g090820.2 I 0.339
PGSC0003DMG401004023 Solanum tuberosum PGSC0003DMG401004023 I 0.339
Lus10040911.g Linum usitatissimum Lus10040911.g I 0.339
Thhalv10026540m.g Eutrema salsugineum Thhalv10026540m.g I 0.338
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.337
Bra013406 Brassica rapa Bra013406 I 0.337
Bra001071 Brassica rapa Bra001071 I 0.336
Gorai.N013300 Gossypium raimondii Gorai.N013300 I 0.336
Bra030341 Brassica rapa Bra030341 I 0.335
evm.TU.supercontig_55.150 Carica papaya evm.TU.supercontig_55.150 I 0.334
Thhalv10003411m.g Eutrema salsugineum Thhalv10003411m.g I 0.334
Ca_02416 Cicer arietinum Ca_02416 I 0.333
Gorai.011G105700 Gossypium raimondii Gorai.011G105700 I 0.333
Bra032023 Brassica rapa Bra032023 I 0.333
Carubv10013628m.g Capsella rubella Carubv10013628m.g I 0.333
ATHSFA1E Arabidopsis lyrata fgenesh2_kg.3__246__AT3G02990.1 I 0.333
HSFA1E Arabidopsis thaliana AT3G02990 D 0.333
Bostr.19046s0011 Boechera stricta Bostr.19046s0011 I 0.333
Cagra.1194s0002 Capsella grandiflora Cagra.1194s0002 I 0.333
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.332
SapurV1A.0182s0110 Salix purpurea SapurV1A.0182s0110 I 0.332
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.332
HSF4 Vitis vinifera VIT_07s0031g00670 I 0.332
Bo4g125760 Brassica oleracea Bo4g125760 I 0.332
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.331
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.331
Bo5g150300 Brassica oleracea Bo5g150300 I 0.331
mgf014237m Mimulus guttatus mgf014237m I 0.331
SapurV1A.0151s0340 Salix purpurea SapurV1A.0151s0340 I 0.331
Thhalv10027510m.g Eutrema salsugineum Thhalv10027510m.g I 0.331
SapurV1A.3823s0010 Salix purpurea SapurV1A.3823s0010 I 0.331
TRAES3BF002300100CFD_g Triticum aestivum TRAES3BF002300100CFD_g I 0.331
F775_19394 Aegilops tauschii F775_19394 I 0.331
GRMZM2G115456 Zea mays GRMZM2G115456 I 0.330
Lus10006618.g Linum usitatissimum Lus10006618.g I 0.330
TRIUR3_02308 Triticum urartu TRIUR3_02308 I 0.330
TCM_011279 Theobroma cacao TCM_011279 I 0.330
Thhalv10011051m.g Eutrema salsugineum Thhalv10011051m.g I 0.329
Bo4g139650 Brassica oleracea Bo4g139650 N 0.329
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.328
GLYMA01G39260 Glycine max GLYMA01G39260 I 0.328
Gorai.007G053900 Gossypium raimondii Gorai.007G053900 I 0.328
cassava18058.valid.m1 Manihot esculenta cassava18058.valid.m1 I 0.328
HSF4 Populus trichocarpa POPTR_0007s11030 I 0.328
GLYMA11G06010 Glycine max GLYMA11G06010 I 0.328
MTR_5g029680 Medicago truncatula MTR_5g029680 I 0.328
MDP0000319456 Malus domestica MDP0000319456 I 0.327
FOMPIDRAFT_1100359 Fomitopsis pinicola FOMPIDRAFT_1100359 I 0.327
PRUPE_ppa006514mg Prunus persica PRUPE_ppa006514mg I 0.327
Pm005887 Prunus mume Pm005887 I 0.327
chr4.CM0046.500.nc Lotus japonicus chr4.CM0046.500.nc I 0.327
mgf009243m Mimulus guttatus mgf009243m I 0.326
PHLGIDRAFT_68835 Phlebiopsis gigantea PHLGIDRAFT_68835 I 0.326
Bo3g157380 Brassica oleracea Bo3g157380 I 0.326
Aquca_001_00047 Aquilegia coerulea Aquca_001_00047 I 0.326
MTR_5g017470 Medicago truncatula MTR_5g017470 I 0.325
GSMUA_Achr3G06020_001 Musa acuminata GSMUA_Achr3G06020_001 I 0.325
PGSC0003DMG400027036 Solanum tuberosum PGSC0003DMG400027036 I 0.325
Bra021381 Brassica rapa Bra021381 I 0.325
Bo1g155010 Brassica oleracea Bo1g155010 I 0.325
MDP0000156337 Malus domestica MDP0000156337 I 0.324
AT-HSFA7A Arabidopsis lyrata fgenesh2_kg.5__1540__AT3G51910.1 I 0.324
PK03562.1 Cannabis sativa PK03562.1 I 0.324
VIT_16s0039g01840 Vitis vinifera VIT_16s0039g01840 I 0.324
Bra012571 Brassica rapa Bra012571 I 0.323
Bo7g106320 Brassica oleracea Bo7g106320 I 0.323
MDP0000126826 Malus domestica MDP0000126826 I 0.323
MTR_5g010680 Medicago truncatula MTR_5g010680 I 0.323
Gorai.004G257000 Gossypium raimondii Gorai.004G257000 I 0.323
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.323
Bra023584 Brassica rapa Bra023584 I 0.323
MDP0000150429 Malus domestica MDP0000150429 I 0.322
Pavir.Ba01265 Panicum virgatum Pavir.Ba01265 I 0.322
GLYMA16G13400 Glycine max GLYMA16G13400 I 0.322
PDK_20s1396361g002 Phoenix dactylifera PDK_20s1396361g002 I 0.322
GLYMA11G01190 Glycine max GLYMA11G01190 I 0.322
cassava13765.valid.m1 Manihot esculenta cassava13765.valid.m1 I 0.322
PK09831.1 Cannabis sativa PK09831.1 I 0.322
MDP0000260377 Malus domestica MDP0000260377 I 0.322
Bo5g048950 Brassica oleracea Bo5g048950 I 0.321
Pavir.Ib04475 Panicum virgatum Pavir.Ib04475 I 0.321
F775_19430 Aegilops tauschii F775_19430 I 0.321
GRMZM2G384339 Zea mays GRMZM2G384339 I 0.321
Si035526m.g Setaria italica Si035526m.g I 0.321
GSMUA_Achr4G04500_001 Musa acuminata GSMUA_Achr4G04500_001 I 0.321
TRIUR3_31165 Triticum urartu TRIUR3_31165 I 0.321
Cagra.1043s0019 Capsella grandiflora Cagra.1043s0019 I 0.321
BRADI1G01130 Brachypodium distachyon BRADI1G01130 I 0.321
Lus10019348.g Linum usitatissimum Lus10019348.g I 0.321
Solyc08g005170.2 Solanum lycopersicum Solyc08g005170.2 I 0.321
PGSC0003DMG400017846 Solanum tuberosum PGSC0003DMG400017846 I 0.321
Bra023258 Brassica rapa Bra023258 I 0.321
Bo3g055950 Brassica oleracea Bo3g055950 I 0.320
Eucgr.I00929 Eucalyptus grandis Eucgr.I00929 I 0.320
Sb01g000730 Sorghum bicolor Sb01g000730 I 0.320
Ca_00428 Cicer arietinum Ca_00428 I 0.320
Pavir.Ia00087 Panicum virgatum Pavir.Ia00087 I 0.320
Lus10022083.g Linum usitatissimum Lus10022083.g I 0.320
SapurV1A.0015s0620 Salix purpurea SapurV1A.0015s0620 I 0.320
MLOC_75166 Hordeum vulgare MLOC_75166 I 0.319
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.319
Bra020988 Brassica rapa Bra020988 I 0.319
POPTR_0010s11490 Populus trichocarpa POPTR_0010s11490 I 0.319
Lus10009351.g Linum usitatissimum Lus10009351.g I 0.319
PGSC0003DMG400028414 Solanum tuberosum PGSC0003DMG400028414 I 0.319