CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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HHAL000384-PA
(
Halyomorpha halys
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
HHAL000384-PA
T243446_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hsf
M03908_2.00
Drosophila melanogaster
BVGAANRTTCTVGAANN
NNTTCBAGAAYNTTCBV
SELEX
Nitta et al.(2015)
Hsf_1
0.323
0.594
Hsf
M03909_2.00
Drosophila melanogaster
NVGAAYNTTCBAGAANN
NNTTCTVGAANRTTCBN
SELEX
Nitta et al.(2015)
Hsf_2
0.323
0.594
Hsf
M03910_2.00
Drosophila melanogaster
NVGAAYNTTCTVGAANN
NNTTCBAGAANRTTCBN
SELEX
Nitta et al.(2015)
Hsf_3
0.323
0.594
Hsf
M03911_2.00
Drosophila melanogaster
NVGAANRTTCBAGAANN
NNTTCTVGAAYNTTCBN
SELEX
Nitta et al.(2015)
Hsf_4
0.323
0.594
Hsf
M06388_2.00
Drosophila melanogaster
KMGAADNTTCKMGA
TCKMGAANHTTCKM
B1H
Zhu et al.(2011)
Hsf_FlyReg_FBgn0001222
0.323
0.594
Hsf
M10869_2.00
Drosophila melanogaster
HTTCK
MGAAD
Transfac
Matys et al.(2006)
I$HSF_01
0.323
0.594
Hsf
M10870_2.00
Drosophila melanogaster
MGAADMGAADMGAAD
HTTCKHTTCKHTTCK
Transfac
Matys et al.(2006)
I$HSF_02
0.323
0.594
Hsf
M10871_2.00
Drosophila melanogaster
MGAADHTTCKHTTCK
MGAADMGAADHTTCK
Transfac
Matys et al.(2006)
I$HSF_03
0.323
0.594
Hsf
M10872_2.00
Drosophila melanogaster
MGAADHTTCKMGAAD
HTTCKMGAADHTTCK
Transfac
Matys et al.(2006)
I$HSF_04
0.323
0.594
Hsf
M10873_2.00
Drosophila melanogaster
HTTCKHTTCKMGAAD
HTTCKMGAADMGAAD
Transfac
Matys et al.(2006)
I$HSF_05
0.323
0.594
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HHAL000384-PA
HSF
13
114
FVAKLWQMVCDPKYNDLISWCDKGNSFVIKDQTRFCSELLPMFYKHNNMASFIRQLNKYGFRKVNSPVTSASLKGDVSDFEFSHPHFIKDCPFLLDQIKRKV
Links
Other
HSF
family TFs
Other
Halyomorpha halys
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy