PK12075.1 (Cannabis sativa)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 PK12075.1 T243461_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA

TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.336 0.731
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG

CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.336 0.731
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA

TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.322 0.701
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN

NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.322 0.701
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK12075.1 HSF 1 68

Links

Other HSF family TFs
Other Cannabis sativa TFs

Invalid Input OrderBy

405 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action