PK26417.1 (Cannabis sativa)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 PK26417.1 T243474_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.322 0.592
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.322 0.592
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK26417.1 HSF 5 61

Links

Other HSF family TFs
Other Cannabis sativa TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10011185.g Linum usitatissimum Lus10011185.g I 0.354
Gorai.011G027400 Gossypium raimondii Gorai.011G027400 I 0.334
OLONG_012454 Oryza longistaminata OLONG_012454 I 0.333
Pavir.Ga00998 Panicum virgatum Pavir.Ga00998 I 0.333
ONIVA04G20610 Oryza nivara ONIVA04G20610 I 0.333
OMERI04G18580 Oryza meridionalis OMERI04G18580 I 0.333
GRMZM2G301485 Zea mays GRMZM2G301485 I 0.333
LPERR04G18020 Leersia perrieri LPERR04G18020 I 0.333
OBART04G22030 Oryza barthii OBART04G22030 I 0.333
OGLUM04G22060 Oryza glumaepatula OGLUM04G22060 I 0.333
OB04G29050 Oryza brachyantha OB04G29050 I 0.333
OPUNC04G19790 Oryza punctata OPUNC04G19790 I 0.333
ORGLA04G0190900 Oryza glaberrima ORGLA04G0190900 I 0.333
Sb06g025710 Sorghum bicolor Sb06g025710 I 0.333
TCM_029886 Theobroma cacao TCM_029886 I 0.333
HSFB2A Oryza sativa OS04G0568700 I 0.333
ORUFI04G23680 Oryza rufipogon ORUFI04G23680 I 0.333
BGIOSGA016941 Oryza indica BGIOSGA016941 I 0.333
mgf025463m Mimulus guttatus mgf025463m I 0.332
PGSC0003DMG400017334 Solanum tuberosum PGSC0003DMG400017334 I 0.331
Cucsa.338180 Cucumis sativus Cucsa.338180 I 0.326
mgf002110m Mimulus guttatus mgf002110m I 0.326
Gorai.006G087100 Gossypium raimondii Gorai.006G087100 I 0.326
GRMZM2G098696 Zea mays GRMZM2G098696 I 0.326
Gorai.004G208800 Gossypium raimondii Gorai.004G208800 I 0.325
Eucgr.D00627 Eucalyptus grandis Eucgr.D00627 I 0.324
Carubv10007409m.g Capsella rubella Carubv10007409m.g I 0.324
PGSC0003DMG400014323 Solanum tuberosum PGSC0003DMG400014323 I 0.324
GLYMA11G02800 Glycine max GLYMA11G02800 I 0.323
HSFB2C Oryza sativa OS09G0526600 I 0.323
Bo3g045370 Brassica oleracea Bo3g045370 I 0.323
Solyc03g026020.2 Solanum lycopersicum Solyc03g026020.2 I 0.323
GLYMA15G09280 Glycine max GLYMA15G09280 I 0.323
GRMZM2G164909 Zea mays GRMZM2G164909 I 0.323
Lus10018488.g Linum usitatissimum Lus10018488.g I 0.323
AMTR_s00069p00068180 Amborella trichopoda AMTR_s00069p00068180 I 0.323
Ca_02416 Cicer arietinum Ca_02416 I 0.323
PK17549.1 Cannabis sativa PK17549.1 I 0.322
AT-HSFB2B Arabidopsis lyrata scaffold_603575.1 I 0.322
Bostr.25463s0156 Boechera stricta Bostr.25463s0156 I 0.322
Si030094m.g Setaria italica Si030094m.g I 0.322
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.322
Cla011664 Citrullus lanatus Cla011664 I 0.322
HSFB2B Arabidopsis thaliana AT4G11660 D 0.322
Cucsa.206000 Cucumis sativus Cucsa.206000 I 0.322
BGIOSGA011509 Oryza indica BGIOSGA011509 I 0.322
mgf014237m Mimulus guttatus mgf014237m I 0.322
BGIOSGA029403 Oryza indica BGIOSGA029403 I 0.322
AT-HSFB2B Vitis vinifera VIT_02s0025g04170 I 0.322
Solyc08g080540.2 Solanum lycopersicum Solyc08g080540.2 I 0.322
Thhalv10028744m.g Eutrema salsugineum Thhalv10028744m.g I 0.322
OMERI09G12670 Oryza meridionalis OMERI09G12670 I 0.322
GLYMA01G42640 Glycine max GLYMA01G42640 I 0.322
Gorai.003G160600 Gossypium raimondii Gorai.003G160600 I 0.322
cassava7014.valid.m1 Manihot esculenta cassava7014.valid.m1 I 0.322
OGLUM09G17660 Oryza glumaepatula OGLUM09G17660 I 0.322
OBART08G22550 Oryza barthii OBART08G22550 I 0.322
GRMZM2G165272 Zea mays GRMZM2G165272 I 0.322
Pavir.J03297 Panicum virgatum Pavir.J03297 I 0.322
ONIVA09G18150 Oryza nivara ONIVA09G18150 I 0.322
evm.TU.supercontig_74.64 Carica papaya evm.TU.supercontig_74.64 I 0.322
ORUFI09G18440 Oryza rufipogon ORUFI09G18440 I 0.322
Eucgr.E00555 Eucalyptus grandis Eucgr.E00555 I 0.322
BRADI4G35780 Brachypodium distachyon BRADI4G35780 I 0.322
LPERR09G13100 Leersia perrieri LPERR09G13100 I 0.322
OPUNC09G15460 Oryza punctata OPUNC09G15460 I 0.322
Cucsa.139730 Cucumis sativus Cucsa.139730 I 0.321
Lus10008007.g Linum usitatissimum Lus10008007.g I 0.321
Cagra.1912s0005 Capsella grandiflora Cagra.1912s0005 I 0.321
Carubv10001204m.g Capsella rubella Carubv10001204m.g I 0.321
SapurV1A.0507s0120 Salix purpurea SapurV1A.0507s0120 I 0.321
Lus10024508.g Linum usitatissimum Lus10024508.g I 0.321
PGSC0003DMG400012105 Solanum tuberosum PGSC0003DMG400012105 I 0.321
OMERI08G17470 Oryza meridionalis OMERI08G17470 I 0.321
ONIVA08G25630 Oryza nivara ONIVA08G25630 I 0.321
30190.m011156 Ricinus communis 30190.m011156 I 0.321
ORGLA08G0219000 Oryza glaberrima ORGLA08G0219000 I 0.321
OGLUM08G23900 Oryza glumaepatula OGLUM08G23900 I 0.321
OB08G29340 Oryza brachyantha OB08G29340 I 0.321
BGIOSGA026537 Oryza indica BGIOSGA026537 I 0.321
Bra040968 Brassica rapa Bra040968 I 0.321
GSMUA_Achr4G29100_001 Musa acuminata GSMUA_Achr4G29100_001 I 0.321
LPERR08G19290 Leersia perrieri LPERR08G19290 I 0.321
ORUFI08G25100 Oryza rufipogon ORUFI08G25100 I 0.321
OPUNC08G20670 Oryza punctata OPUNC08G20670 I 0.321
POPTR_0001s08990 Populus trichocarpa POPTR_0001s08990 I 0.321
TCM_016198 Theobroma cacao TCM_016198 I 0.321
PGSC0003DMG400003053 Solanum tuberosum PGSC0003DMG400003053 I 0.321
Sb02g030490 Sorghum bicolor Sb02g030490 I 0.321
HSFB2B Oryza sativa OS08G0546800 I 0.321
Bra012571 Brassica rapa Bra012571 I 0.320
gw1.42.207.1 Physcomitrella patens gw1.42.207.1 I 0.320
SapurV1A.0228s0170 Salix purpurea SapurV1A.0228s0170 I 0.320
evm.TU.supercontig_27.46 Carica papaya evm.TU.supercontig_27.46 I 0.320
Eucgr.A01948 Eucalyptus grandis Eucgr.A01948 I 0.320
HSF1 Arabidopsis lyrata fgenesh2_kg.7__2533__AT4G17750.1 I 0.320
Bo7g106320 Brassica oleracea Bo7g106320 I 0.320
29636.m000750 Ricinus communis 29636.m000750 I 0.320
Pm010031 Prunus mume Pm010031 I 0.319
VIT_12s0028g01410 Vitis vinifera VIT_12s0028g01410 I 0.319
gene02408-v1.0-hybrid Fragaria vesca gene02408-v1.0-hybrid I 0.319
OMERI03G25120 Oryza meridionalis OMERI03G25120 I 0.319
Cla009775 Citrullus lanatus Cla009775 I 0.319
GSMUA_Achr4G19760_001 Musa acuminata GSMUA_Achr4G19760_001 I 0.319
GLYMA19G31940 Glycine max GLYMA19G31940 I 0.319