CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Scas_Contig645.15
(
Saccharomyces castellii
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
Scas_Contig645.15
T243478_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MGA1
M01554_2.00
Saccharomyces cerevisiae
NNNTTCBNHN
NDNVGAANNN
PBM
Zhu et al.(2009)
Mga1
0.362
0.604
MGA1
M08581_2.00
Saccharomyces cerevisiae
NDHDDNRTGTTCTHTVNNNHH
DDNNNBADAGAACAYNHHDHN
Misc
DeBoer et al.(2011)
YGR249W_809
0.362
0.604
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Scas_Contig645.15
HSF
6
114
FIHQLHSILQEPTLDDWITWSSFDNNVFILKPYDPNFSDKVLKKYFKHGNISSFVRQLHMYGFHKIATVHNNNNVVNDKVQTIWHFKHPSGNFTRDVHLDSLKKIQRKS
Links
Other
HSF
family TFs
Other
Saccharomyces castellii
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy