XP_002937263 (Xenopus tropicalis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 XP_002937263 T243504_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSF2
M03324_2.00
Homo sapiens
GAANVTTCTAGAA

TTCTAGAABNTTC
SELEX
Jolma et al.(2013)
HSF2_1
0.483 0.900
HSF2
M02744_2.00
Homo sapiens
GAABGTTCTRGA

TCYAGAACVTTC
SELEX
Jolma et al.(2010)
HSF2_dimertrimer
0.483 0.900
HSF2
M05505_2.00
Homo sapiens
VGAABVTTCBVGAWN

NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX
0.483 0.900
HSF2
M05507_2.00
Homo sapiens
VGAANNTTCBVGAAN

NTTCBVGAANNTTCB
SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX
0.483 0.900
HSF2
M09229_2.00
Homo sapiens
VGAABVTTCKVGAN

NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A
0.483 0.900
HSF2
M10859_2.00
Homo sapiens
VGAANNWTCB

VGAWNNTTCB
Transfac
Matys et al.(2006)
V$HSF2_01
0.483 0.900
HSF2
M10860_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_02
0.483 0.900
HSF2
M10861_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_Q6
0.483 0.900
HSF2
M05506_2.00
Homo sapiens
RGAABVTTCYRGAWN

NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX
0.483 0.900
HSF2
M05508_2.00
Homo sapiens
RGAABVTTCYRGAWN

NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX
0.483 0.900
Hsf2
M09231_2.00
Mus musculus
VGAABVTTCKVGAN

NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A
0.474 0.875
hsf2
M02248_2.00
Danio rerio
NNNWGTTCTATNN

NNATAGAACWNNN
PBM
Weirauch et al.(2014)
pTH9010
0.464 0.850
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937263 HSF 34 127

Links

Other HSF family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action