CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshCV_pg.C_scaffold_14000165
(
Chlorella vulgaris
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
fgeneshCV_pg.C_scaffold_14000165
T243561_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.333
0.600
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG
CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.333
0.600
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshCV_pg.C_scaffold_14000165
HSF
1
84
MVSDPDLKEIISWSKDGHSFTVWNHSEFENNVLPKKFKHQNFSSFVRQLNTYNFRKSDPSAWQFSNEHFIRGRADLLHLIKRKN
Links
Other
HSF
family TFs
Other
Chlorella vulgaris
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy