CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000109700
(
Globodera pallida
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
GPLIN_000109700
T243671_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hsf-1
M00682_2.00
Caenorhabditis elegans
TTCYAGAA
TTCTRGAA
PBM
Narasimhan et al.(2015)
pTH10796
0.480
0.635
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000109700
HSF
73
176
FLIKLWNIVEDPSHWEVIRWDESGMSFHIMKPYVFCSDILPFYFKHKNLNSLVRQLNMYGFRKNTPIERSGLARAESDQDHLEFFHSFFRRDHPEMLINIHRKV
Links
Other
HSF
family TFs
Other
Globodera pallida
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy