GPLIN_000673800 (Globodera pallida)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 GPLIN_000673800 T243672_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hsf-1
M00682_2.00
Caenorhabditis elegans
TTCYAGAA

TTCTRGAA
PBM
Narasimhan et al.(2015)
pTH10796
0.480 0.635
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000673800 HSF 105 208

Links

Other HSF family TFs
Other Globodera pallida TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GPLIN_000109700 Globodera pallida GPLIN_000109700 I 0.716
BXY_0882000 Bursaphelenchus xylophilus BXY_0882000 I 0.601
ASU_10106 Ascaris suum ASU_10106 I 0.597
ALUE_0000801801 Ascaris lumbricoides ALUE_0000801801 I 0.597
TCNE_0000949901 Toxocara canis TCNE_0000949901 I 0.597
EVEC_0000124901 Enterobius vermicularis EVEC_0000124901 I 0.585
MhA1_Contig1076.frz3.gene4 Meloidogyne hapla MhA1_Contig1076.frz3.gene4 I 0.577
Minc16435 Meloidogyne incognita Minc16435 I 0.570
SMUV_0000043201 Syphacia muris SMUV_0000043201 I 0.568
ASIM_0001223701 Anisakis simplex ASIM_0001223701 I 0.561
DICVIV_08378 Dictyocaulus viviparus DICVIV_08378 I 0.551
HCOI00423400 Haemonchus contortus HCOI00423400 I 0.542
HCOI00424600 Haemonchus contortus HCOI00424600 I 0.542
ANCCAN_00795 Ancylostoma caninum ANCCAN_00795 I 0.541
SVUK_0000175201 Strongylus vulgaris SVUK_0000175201 I 0.541
ANCCEY_01944 Ancylostoma ceylanicum ANCCEY_01944 I 0.541
ACOC_0000071501 Angiostrongylus costaricensis ACOC_0000071501 I 0.541
LOAG_08901 Loa loa LOAG_08901 I 0.535
nLs.2.1.2.g08921 Litomosoides sigmodontis nLs.2.1.2.g08921 I 0.533
NBR_0001979501 Nippostrongylus brasiliensis NBR_0001979501 I 0.523
WBGene00238233 Onchocerca volvulus WBGene00238233 I 0.523
nDi.2.2.2.g05157 Dirofilaria immitis nDi.2.2.2.g05157 I 0.523
nOo.2.0.1.g06259 Onchocerca ochengi nOo.2.0.1.g06259 I 0.523
Bm6746 Brugia malayi Bm6746 I 0.522
nAv.1.0.1.g08619 Acanthocheilonema viteae nAv.1.0.1.g08619 I 0.522
EEL_0000787901 Elaeophora elaphi EEL_0000787901 I 0.522
BTMF_0001609701 Brugia timori BTMF_0001609701 I 0.522
TCLT_0000441901 Thelazia callipaeda TCLT_0000441901 I 0.512
CBN21581 Caenorhabditis brenneri CBN21581 I 0.496
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4 Meloidogyne floridensis snap_masked-nMf.1.1.scaf11979-processed-gene-0.4 I 0.495
CRE28338 Caenorhabditis remanei CRE28338 I 0.495
hsf-1 Caenorhabditis elegans WBGene00002004 D 0.480
DME_0000290701 Dracunculus medinensis DME_0000290701 I 0.458
SPAL_0000387400 Strongyloides papillosus SPAL_0000387400 I 0.455
SVE_1155700 Strongyloides venezuelensis SVE_1155700 I 0.449
SSTP_0000347800 Strongyloides stercoralis SSTP_0000347800 I 0.429
PTRK_0001079800 Parastrongyloides trichosuri PTRK_0001079800 I 0.419
GPUH_0001175501 Gongylonema pulchrum GPUH_0001175501 I 0.403
nRc.2.0.1.g30983 Romanomermis culicivorax nRc.2.0.1.g30983 I 0.395
SPAL_0001635100 Strongyloides papillosus SPAL_0001635100 I 0.381
SVE_0431600 Strongyloides venezuelensis SVE_0431600 I 0.378
PTRK_0000997100 Parastrongyloides trichosuri PTRK_0000997100 I 0.377
SPAL_0000387600 Strongyloides papillosus SPAL_0000387600 I 0.375
SVE_1156000 Strongyloides venezuelensis SVE_1156000 I 0.373
nRc.2.0.1.g38503 Romanomermis culicivorax nRc.2.0.1.g38503 I 0.372
SSTP_0000347500 Strongyloides stercoralis SSTP_0000347500 N 0.364
L898_g5106 Steinernema monticolum L898_g5106 I 0.362
L892_g820 Steinernema scapterisci L892_g820 I 0.354
L596_g17815 Steinernema carpocapsae L596_g17815 I 0.354
SSTP_0000175600 Strongyloides stercoralis SSTP_0000175600 I 0.353
L893_g7030 Steinernema glaseri L893_g7030 I 0.351
RSKR_0000052100 Rhabditophanes kr3021 RSKR_0000052100 I 0.345
L889_g598 Steinernema feltiae L889_g598 I 0.342
CapteG130381 Capitella teleta CapteG130381 I 0.338
L898_g35624 Steinernema monticolum L898_g35624 I 0.334
Alligator_sinensis_CCG021829.1 Alligator sinensis Alligator_sinensis_CCG021829.1 I 0.332
O9G_004185 Rozella allomycis O9G_004185 I 0.324
CGI_10007406 Crassostrea gigas CGI_10007406 I 0.324
L804_02322 Cryptococcus gattii L804_02322 I 0.323
T265_09239 Opisthorchis viverrini T265_09239 I 0.323
SBAD_0001111901 Soboliphyme baturini SBAD_0001111901 N 0.321
TC001736 Tribolium castaneum TC001736 I 0.321
K443DRAFT_105640 Laccaria amethystina K443DRAFT_105640 I 0.319
HYDPIDRAFT_32921 Hydnomerulius pinastri HYDPIDRAFT_32921 I 0.319
K443DRAFT_89912 Laccaria amethystina K443DRAFT_89912 I 0.319
LACBIDRAFT_147701 Laccaria bicolor LACBIDRAFT_147701 I 0.319
YQE_02436 Dendroctonus ponderosae YQE_02436 I 0.318