NBR_0001979501 (Nippostrongylus brasiliensis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 NBR_0001979501 T243692_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hsf-1
M00682_2.00
Caenorhabditis elegans
TTCYAGAA

TTCTRGAA
PBM
Narasimhan et al.(2015)
pTH10796
0.536 0.781
HSF4
M03325_2.00
Homo sapiens
GAANNTTCBVGAA

TTCBVGAANNTTC
SELEX
Jolma et al.(2013)
HSF4_1
0.319 0.458
HSF4
M05509_2.00
Homo sapiens
VGAABVTTCKVGAAN

NTTCBMGAABVTTCB
SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX
0.319 0.458
HSF4
M10862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF4_Q3
0.319 0.458
HSF4
M05510_2.00
Homo sapiens
RGAABVWDCYRGAWN

NWTCYRGHWBVTTCY
SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX
0.319 0.458
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001979501-mRNA-1 HSF 51 154

Links

Other HSF family TFs
Other Nippostrongylus brasiliensis TFs

Invalid Input OrderBy

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action