CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSAMEG00000013892
(
Ailuropoda melanoleuca
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSAMEG00000013892
T243921_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IRF3
M03331_2.00
Homo sapiens
NNRRAANGGAAACCGAAACYR
YRGTTTCGGTTTCCNTTYYNN
SELEX
Jolma et al.(2013)
IRF3_1
0.933
0.933
IRF3
M05531_2.00
Homo sapiens
DCVGTTTCSNSGAAACCGMAASN
NSTTKCGGTTTCSNSGAAACBGH
SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX
0.933
0.933
IRF3
M05533_2.00
Homo sapiens
HSGAAAVBGAAACYGAAACN
NGTTTCRGTTTCVBTTTCSD
SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX
0.933
0.933
IRF3
M09234_2.00
Homo sapiens
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B
0.933
0.933
IRF3
M10883_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF3_Q3
0.933
0.933
IRF3
M05532_2.00
Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV
BTWTYNKTTTCCDGGAAASHGM
SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX
0.933
0.933
IRF3
M05534_2.00
Homo sapiens
HGGAAABBGAAASBGAAASN
NSTTTCVSTTTCVVTTTCCD
SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX
0.933
0.933
Irf3
M00174_2.00
Mus musculus
RDWNBGMAAS
STTKCVNWHY
PBM
Badis et al.(2009)
Irf3_3985
0.923
0.923
Irf3
M09241_2.00
Mus musculus
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A
0.923
0.923
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMEP00000014658
IRF
7
110
RILPWLVSQLDLGQLEGVAWLDESRTRFRIPWKHGLRQDAQQEDFGIFQAWAEASGAYTPGKDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKVYEFV
Links
Other
IRF
family TFs
Other
Ailuropoda melanoleuca
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004701
Oryza indica
BGIOSGA004701
N
0.000
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
0.000
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
0.000
F775_22564
Aegilops tauschii
F775_22564
I
0.000
F775_23182
Aegilops tauschii
F775_23182
I
0.000
GRMZM2G029292
Zea mays
GRMZM2G029292
I
0.000
GRMZM2G065290
Zea mays
GRMZM2G065290
I
0.000
GRMZM2G382350
Zea mays
GRMZM2G382350
I
0.000
LPERR01G30470
Leersia perrieri
LPERR01G30470
N
0.000
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
0.000
LPERR10G04210
Leersia perrieri
LPERR10G04210
I
0.000
MLOC_6114
Hordeum vulgare
MLOC_6114
I
0.000
OB01G44130
Oryza brachyantha
OB01G44130
I
0.000
OB01G44140
Oryza brachyantha
OB01G44140
I
0.000
OBART01G35280
Oryza barthii
OBART01G35280
N
0.000
OBART01G35310
Oryza barthii
OBART01G35310
I
0.000
OGLUM01G39350
Oryza glumaepatula
OGLUM01G39350
N
0.000
OLONG_000628
Oryza longistaminata
OLONG_000628
N
0.000
OMERI01G32440
Oryza meridionalis
OMERI01G32440
N
0.000
OMERI01G32480
Oryza meridionalis
OMERI01G32480
I
0.000
ONIVA01G40310
Oryza nivara
ONIVA01G40310
N
0.000
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
0.000
OPUNC01G34260
Oryza punctata
OPUNC01G34260
N
0.000
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
0.000
ORGLA01G0291600
Oryza glaberrima
ORGLA01G0291600
N
0.000
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
0.000
ORUFI01G38630
Oryza rufipogon
ORUFI01G38630
N
0.000
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
0.000
OS01G0820400
Oryza sativa
OS01G0820400
N
0.000
OS01G0820700
Oryza sativa
OS01G0820700
I
0.000
Pavir.Eb03559
Panicum virgatum
Pavir.Eb03559
I
0.000
Pavir.J31756
Panicum virgatum
Pavir.J31756
I
0.000
Sb03g038170
Sorghum bicolor
Sb03g038170
I
0.000
Sb03g038180
Sorghum bicolor
Sb03g038180
I
0.000
Si004791m.g
Setaria italica
Si004791m.g
I
0.000
TRAES3BF081400030CFD_g
Triticum aestivum
TRAES3BF081400030CFD_g
I
0.000
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
0.000
Traes_3B_8B0D448D8
Triticum aestivum
Traes_3B_8B0D448D8
I
0.000
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
0.000
Traes_3DL_7456F61A3
Triticum aestivum
Traes_3DL_7456F61A3
N
0.000
TRIUR3_27575
Triticum urartu
TRIUR3_27575
I
0.000