ENSCSAG00000002477 (Chlorocebus sabaeus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCSAG00000002477 T243993_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF3
M03331_2.00
Homo sapiens
NNRRAANGGAAACCGAAACYR

YRGTTTCGGTTTCCNTTYYNN
SELEX
Jolma et al.(2013)
IRF3_1
0.952 0.952
IRF3
M05531_2.00
Homo sapiens
DCVGTTTCSNSGAAACCGMAASN

NSTTKCGGTTTCSNSGAAACBGH
SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX
0.952 0.952
IRF3
M05533_2.00
Homo sapiens
HSGAAAVBGAAACYGAAACN

NGTTTCRGTTTCVBTTTCSD
SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX
0.952 0.952
IRF3
M09234_2.00
Homo sapiens
RRRARDGAAAVDGRAASNRA

TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B
0.952 0.952
IRF3
M10883_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF3_Q3
0.952 0.952
IRF3
M05532_2.00
Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV

BTWTYNKTTTCCDGGAAASHGM
SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX
0.952 0.952
IRF3
M05534_2.00
Homo sapiens
HGGAAABBGAAASBGAAASN

NSTTTCVSTTTCVVTTTCCD
SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX
0.952 0.952
Irf3
M00174_2.00
Mus musculus
RDWNBGMAAS

STTKCVNWHY
PBM
Badis et al.(2009)
Irf3_3985
0.837 0.837
Irf3
M09241_2.00
Mus musculus
RRRARDGAAAVDGRAASNRA

TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A
0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000015566 IRF 7 110

Links

Other IRF family TFs
Other Chlorocebus sabaeus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB113 Arabidopsis thaliana AT1G66370 D 0.000
Ca_19630 Cicer arietinum Ca_19630 I 0.000
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.000
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.000
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.000
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.000
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.000
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.000
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.000
Ciclev10017654m.g Citrus clementina Ciclev10017654m.g I 0.000
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I 0.000
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.000
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.000
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.000
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I 0.000
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.000
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I 0.000
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.000
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.000
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.000
Ca_22078 Cicer arietinum Ca_22078 I 0.000
Pm025102 Prunus mume Pm025102 I 0.000
Pm025429 Prunus mume Pm025429 I 0.000
Pm029440 Prunus mume Pm029440 I 0.000
Pm029442 Prunus mume Pm029442 I 0.000
Pm031337 Prunus mume Pm031337 I 0.000
27763.m000042 Ricinus communis 27763.m000042 I 0.000
30128.m008730 Ricinus communis 30128.m008730 I 0.000
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.000
Cucsa.277570 Cucumis sativus Cucsa.277570 I 0.000
mgf019317m Mimulus guttatus mgf019317m I 0.000
mgf022565m Mimulus guttatus mgf022565m I 0.000
Aquca_015_00085 Aquilegia coerulea Aquca_015_00085 I 0.000
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I 0.000
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I 0.000
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I 0.000
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I 0.000
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.000
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.000
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.000
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.000
MDP0000192051 Malus domestica MDP0000192051 I 0.000
MDP0000478453 Malus domestica MDP0000478453 I 0.000
orange1.1g044864m.g Citrus sinensis orange1.1g044864m.g I 0.000
SapurV1A.0230s0240 Salix purpurea SapurV1A.0230s0240 I 0.000
SapurV1A.0230s0250 Salix purpurea SapurV1A.0230s0250 I 0.000
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I 0.000
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.000
PK05760.1 Cannabis sativa PK05760.1 I 0.000
PK17827.1 Cannabis sativa PK17827.1 I 0.000
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.000
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I 0.000
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.000
Lus10003277.g Linum usitatissimum Lus10003277.g I 0.000
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.000
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.000
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.000
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.000
evm.TU.contig_42663.2 Carica papaya evm.TU.contig_42663.2 I 0.000
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.000
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.000
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.000
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.000
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.000
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.000
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.000
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.000
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.000
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.000
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.000
PDK_20s1447601g001 Phoenix dactylifera PDK_20s1447601g001 I 0.000
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I 0.000
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.000
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.000
GLYMA18G49670 Glycine max GLYMA18G49670 I 0.000
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.000
GLYMA19G02980 Glycine max GLYMA19G02980 I 0.000
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.000
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.000
MTR_0193s0090 Medicago truncatula MTR_0193s0090 I 0.000
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.000
MTR_0247s0040 Medicago truncatula MTR_0247s0040 I 0.000
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.000
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.000
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.000
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.000
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.000
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.000
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.000
GLYMA09G36983 Glycine max GLYMA09G36983 I 0.000
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.000
MYB75 Arabidopsis thaliana AT1G56650 I 0.000
MYB114 Arabidopsis thaliana AT1G66380 I 0.000
MYB90 Arabidopsis thaliana AT1G66390 I 0.000
Bo00835s060 Brassica oleracea Bo00835s060 I 0.000
Bo6g099880 Brassica oleracea Bo6g099880 I 0.000
Bo6g100940 Brassica oleracea Bo6g100940 I 0.000
Bra001917 Brassica rapa Bra001917 I 0.000
Bra004162 Brassica rapa Bra004162 I 0.000
Bra039763 Brassica rapa Bra039763 I 0.000
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.000
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.000
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.000
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.000
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.000
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.000
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.000
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.000
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.000
Si038905m.g Setaria italica Si038905m.g I 0.000
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.000
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.000
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.000
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.000
TCM_019192 Theobroma cacao TCM_019192 I 0.000
TCM_026054 Theobroma cacao TCM_026054 I 0.000
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.000
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.000
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.000
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.000
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.000
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.000
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.000
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.000
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.000
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.000
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.000
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I 0.000
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I 0.000
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I 0.000
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I 0.000
POPTR_0005s14490 Populus trichocarpa POPTR_0005s14490 I 0.000
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.000
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.000
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.000
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I 0.000
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.000
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.000
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.000
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.000
PRUPE_ppa024617mg Prunus persica PRUPE_ppa024617mg N 0.000
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.000