IRF5 (Erinaceus europaeus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSEEUG00000014653 T244053_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Irf5
M00177_2.00
Mus musculus
NNNHGADASH

DSTHTCDNNN
PBM
Badis et al.(2009)
Irf5_3874
0.946 0.946
IRF5
M02256_2.00
Oryctolagus cuniculus
NHCGAAACYN

NRGTTTCGDN
PBM
Weirauch et al.(2014)
pTH9272
0.946 0.946
IRF5
M03332_2.00
Homo sapiens
YCGAAACCGAAMCY

RGKTTCGGTTTCGR
SELEX
Jolma et al.(2013)
IRF5_1
0.946 0.946
IRF5
M03333_2.00
Homo sapiens
HACCGAAACYV

BRGTTTCGGTD
SELEX
Jolma et al.(2013)
IRF5_2
0.946 0.946
IRF5
M05535_2.00
Homo sapiens
NCGAAACCGAWACH

DGTWTCGGTTTCGN
SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX
0.946 0.946
IRF5
M05537_2.00
Homo sapiens
NCGAAACCGAAACY

RGTTTCGGTTTCGN
SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX
0.946 0.946
IRF5
M10884_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF5_Q3
0.946 0.946
IRF5
M05536_2.00
Homo sapiens
NYGAWACYGAWACH

DGTWTCRGTWTCRN
SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX
0.946 0.946
IRF5
M05538_2.00
Homo sapiens
NYGAAACCGAWACY

RGTWTCGGTTTCRN
SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX
0.946 0.946
IRF6
M02253_2.00
Gallus gallus
NNMCNAAWNN

NNWTTNGKNN
PBM
Weirauch et al.(2014)
pTH9178
0.768 0.768
IRF6
M02254_2.00
Meleagris gallopavo
NRNCGAWACY

RGTWTCGNYN
PBM
Weirauch et al.(2014)
pTH9210
0.768 0.768
irf5.L
M02260_2.00
Xenopus laevis
VNCGADACHN

NDGTHTCGNB
PBM
Weirauch et al.(2014)
pTH9367
0.750 0.750
Irf6
M00176_2.00
Mus musculus
NNNHGADASN

NSTHTCDNNN
PBM
Badis et al.(2009)
Irf6_3803
0.732 0.732
irf6.2
M02259_2.00
Xenopus tropicalis
NVNHGAWACH

DGTWTCDNBN
PBM
Weirauch et al.(2014)
pTH9302
0.732 0.732
IRF6
M05527_2.00
Homo sapiens
RGTWTCGNNNNNNYGAWACY

RGTWTCRNNNNNNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX
0.732 0.732
IRF6
M05529_2.00
Homo sapiens
ACCGAAACT

AGTTTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX
0.732 0.732
IRF6
M05528_2.00
Homo sapiens
RGTWTCGNHNNDNYGAWACY

RGTWTCRNHNNDNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX
0.732 0.732
IRF6
M05530_2.00
Homo sapiens
ACCGAWACY

RGTWTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX
0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000013362 IRF 1 56

Links

Other IRF family TFs
Other Erinaceus europaeus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
IRF6 Anolis carolinensis ENSACAG00000005931 I 0.750
ENSAMEG00000005109 Ailuropoda melanoleuca ENSAMEG00000005109 I 0.946
ENSAPLG00000006203 Anas platyrhynchos ENSAPLG00000006203 I 0.804
IRF5 Callithrix jacchus ENSCJAG00000018061 I 0.946
IRF5 Cavia porcellus ENSCPOG00000000246 I 0.946
irf6 Danio rerio ENSDARG00000101986 I 0.750
ENSFALG00000000504 Ficedula albicollis ENSFALG00000000504 I 0.754
IRF5 Felis catus ENSFCAG00000000956 I 0.946
IRF5 Homo sapiens ENSG00000128604 D 0.911
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I 0.768
ENSMEUG00000002435 Macropus eugenii ENSMEUG00000002435 I 0.929
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I 0.750
IRF5 Microcebus murinus ENSMICG00000000138 I 0.946
IRF6 Monodelphis domestica ENSMODG00000002539 I 0.750
ENSMPUG00000006034 Mustela putorius furo ENSMPUG00000006034 I 0.946
Irf5 Mus musculus ENSMUSG00000029771 D 0.946
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I 0.750
IRF5 Otolemur garnettii ENSOGAG00000009608 I 0.768
IRF5 Ochotona princeps ENSOPRG00000006148 I 0.946
Irf5 Rattus norvegicus ENSRNOG00000007437 I 0.929
IRF5 Sus scrofa ENSSSCG00000016573 I 0.946
ENSSTOG00000004858 Ictidomys tridecemlineatus ENSSTOG00000004858 I 0.946
Ogr12956 Ophisaurus gracilis Ogr12956 I 0.750
Pvit_14327 Pogona vitticeps Pvit_14327 I 0.804
Pvit_15428 Pogona vitticeps Pvit_15428 I 0.750
irf6.2 Xenopus tropicalis XB-GENE-5910331 D 0.732
irf6.2.L Xenopus laevis XB-GENE-5910427 I 0.750
irf5.L Xenopus laevis XB-GENE-998629 D 0.750