CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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IRF7
(
Homo sapiens
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSG00000185507
T244084_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This gene encodes interferon regulatory factor 7, a member of the interferon regulatory transcription factor (IRF) family. It has been shown to play a role in the transcriptional activation of virus-inducible cellular genes, including interferon beta chain genes. Inducible expression of IRF7 is largely restricted to lymphoid tissue. The encoded protein plays an important role in the innate immune response against DNA and RNA viruses. [provided by RefSeq, Jul 2021]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IRF7
M03337_2.00
Homo sapiens
HCGAAAVYGAAAVT
ABTTTCRBTTTCGD
SELEX
Jolma et al.(2013)
IRF7_1
(Direct)
(Direct)
IRF7
M03338_2.00
Homo sapiens
RAANCGAAAWTCGNTTY
RAANCGAWTTTCGNTTY
SELEX
Jolma et al.(2013)
IRF7_2
(Direct)
(Direct)
IRF7
M05547_2.00
Homo sapiens
NCGAAAVYGAAANYN
NRNTTTCRBTTTCGN
SELEX
Yin et al.(2017)
IRF7_eDBD_HT-SELEX
(Direct)
(Direct)
IRF7
M05548_2.00
Homo sapiens
NNGAAARTGAAAVYR
YRBTTTCAYTTTCNN
SELEX
Yin et al.(2017)
IRF7_eDBD_Methyl-HT-SELEX
(Direct)
(Direct)
IRF7
M09238_2.00
Homo sapiens
RAAASYRAAW
WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_HUMAN.H11MO.0.C
(Direct)
(Direct)
IRF7
M10894_2.00
Homo sapiens
NNSGAAWNYGAAANYBDV
BHVRNTTTCRNWTTCSNN
Transfac
Matys et al.(2006)
V$IRF7_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf7
M02255_2.00
Mus musculus
DAHNNGAAAN
NTTTCNNDTH
PBM
Weirauch et al.(2014)
pTH3475
0.769
0.769
Irf7
M09244_2.00
Mus musculus
RAAASYRAAW
WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_MOUSE.H11MO.0.C
0.769
0.769
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000329411
IRF
26
138
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000331803
IRF
13
125
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000380697
IRF
26
138
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000380700
IRF
26
138
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000380704
IRF
13
125
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000432403
IRF
26
138
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000433903
IRF
13
125
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000434524
IRF
13
118
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKVGTPAPPRPGWESPPRTPRARHTCSVPLFRPGLWPAAGGRLAAGEVARPPRLRLRSA
ENSP00000434607
IRF
13
125
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
ENSP00000436696
IRF
13
125
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
Links
Other
IRF
family TFs
Other
Homo sapiens
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy