CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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irf9
(
Gasterosteus aculeatus
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSGACG00000001697
T244088_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf9
M00173_2.00
Mus musculus
NNNRAAANN
NNTTTYNNN
PBM
Badis et al.(2009)
Isgf3g_2853
0.712
0.712
Irf9
M09240_2.00
Mus musculus
GAAABHGAAAYT
ARTTTCDVTTTC
Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C
0.712
0.712
IRF9
M02258_2.00
Sus scrofa
WNYGAAASY
RSTTTCRNW
PBM
Weirauch et al.(2014)
pTH9287
0.702
0.702
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000002215
IRF
11
115
RLRSWIVEQVSSGKYPGLVWDDDPRTMFRIPWKHAGKQDFRRDEDAAIFKAWAEFKGKPTAGGQHSPASWKTRLRCALNKSPEFTEVTERAQLDISEPYKVYRLV
ENSGACP00000002220
IRF
11
115
RLRSWIVEQVSSGKYPGLVWDDDPRTMFRIPWKHAGKQDFRRDEDAAIFKAWAEFKGKPTAGGQHSPASWKTRLRCALNKSPEFTEVTERAQLDISEPYKVYRLV
Links
Other
IRF
family TFs
Other
Gasterosteus aculeatus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy