irf4a (Gasterosteus aculeatus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGACG00000016461 T244095_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF4
M03334_2.00
Homo sapiens
HCGAAACCGAAACYW

WRGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF4_1
0.886 0.886
IRF4
M05539_2.00
Homo sapiens
NYGAAACYGAAACYN

NRGTTTCRGTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX
0.886 0.886
IRF4
M07978_2.00
Homo sapiens
DNDVNNGWWVTGAVWVWN

NWBWBTCABWWCNNBHNH
ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha
0.886 0.886
IRF4
M09235_2.00
Homo sapiens
NDWDRRGGAASTGARAVH

DBTYTCASTTCCYYHWHN
Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A
0.886 0.886
IRF4
M09595_2.00
Homo sapiens
HNYGAAASYD

HRSTTTCRND
Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465
0.886 0.886
IRF4
M10885_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_07
0.886 0.886
IRF4
M10886_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_08
0.886 0.886
IRF4
M10887_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5_01
0.886 0.886
IRF4
M10888_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5
0.886 0.886
IRF4
M10889_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q6
0.886 0.886
IRF4
M05540_2.00
Homo sapiens
NYGAAASYGAWASHN

NDSTWTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX
0.886 0.886
Irf4
M00175_2.00
Mus musculus
NNNYGAWASN

NSTWTCRNNN
PBM
Badis et al.(2009)
Irf4_3476
0.876 0.876
Irf4
M09243_2.00
Mus musculus
NDAWVVRGAASTGARAVH

DBTYTCASTTCYBBWTHN
Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A
0.876 0.876
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY

RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.762 0.762
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT

AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.762 0.762
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN

NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.762 0.762
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN

NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.762 0.762
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.762 0.762
IRF8
M10890_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.762 0.762
IRF8
M10891_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.762 0.762
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN

NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.762 0.762
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD

HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.762 0.762
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000021735 IRF 17 122

Links

Other IRF family TFs
Other Gasterosteus aculeatus TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I 0.924
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.905
irf4a Takifugu rubripes ENSTRUG00000011568 I 0.905
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.905
irf4a Oryzias latipes ENSORLG00000017242 I 0.895
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.895
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.895
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.895
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I 0.895
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.895
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.886
IRF4 Homo sapiens ENSG00000137265 D 0.886
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.886
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.886
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.886
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.886
IRF4 Felis catus ENSFCAG00000022941 I 0.886
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.886
IRF4 Echinops telfairi ENSETEG00000018472 I 0.886
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.886
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.886
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.886
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.886
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.886
ENSGMOG00000016994 Gadus morhua ENSGMOG00000016994 I 0.886
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.886
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.886
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.886
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.886
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.886
IRF4 Bos taurus ENSBTAG00000002929 I 0.886
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.886
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.886
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.886
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.886
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.886
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.886
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.886
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.886
Aan_R012662 Calypte anna Aan_R012662 I 0.886
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.886
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.886
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.886
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.886
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.886
IRF4 Equus caballus ENSECAG00000016808 I 0.886
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.886
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.886
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.886
irf4a Danio rerio ENSDARG00000006560 I 0.886
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.881
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.876
irf4b Oryzias latipes ENSORLG00000012712 I 0.876
irf4 Xenopus tropicalis XB-GENE-988321 I 0.876
Irf4 Mus musculus ENSMUSG00000021356 D 0.876
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.876
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.876
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.876
ENSMICG00000011721 Microcebus murinus ENSMICG00000011721 I 0.875
ENSTSYG00000006495 Tarsius syrichta ENSTSYG00000006495 I 0.875
IRF4 Choloepus hoffmanni ENSCHOG00000012417 I 0.875
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.874
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.867
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.867
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.867
irf4b Danio rerio ENSDARG00000055374 I 0.867
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.867
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.867
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.867
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.867
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.867
Tal_R010571 Tyto alba Tal_R010571 I 0.862
ENSPANG00000023389 Papio anubis ENSPANG00000023389 I 0.860
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.848
IRF4 Erinaceus europaeus ENSEEUG00000007703 I 0.829
ENSAMXG00000012775 Astyanax mexicanus ENSAMXG00000012775 I 0.829
IRF4 Ornithorhynchus anatinus ENSOANG00000006326 I 0.820
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.781
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.779
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.779
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.779
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.779
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.769
IRF8 Canis familiaris ENSCAFG00000019919 I 0.769
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.769
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.769
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.769
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.769
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.769
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.769
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.769
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.769
IRF8 Felis catus ENSFCAG00000007615 I 0.769
IRF8 Homo sapiens ENSG00000140968 D 0.769
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.769
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.769
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.762
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.762
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.762
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.762
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.762
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.762
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.762
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.762
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.762
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.762
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.760
Aan_R009222 Calypte anna Aan_R009222 I 0.760
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.760
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.760
Tal_R007108 Tyto alba Tal_R007108 I 0.760
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.760
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.760
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.760
IRF8 Gallus gallus ENSGALG00000005757 I 0.760
ENSMICG00000012090 Microcebus murinus ENSMICG00000012090 I 0.755
irf8.L Xenopus laevis XB-GENE-985949 I 0.752
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.752
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.752
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.752
Irf8 Mus musculus ENSMUSG00000041515 D 0.752
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.752
IRF8 Bos taurus ENSBTAG00000017824 I 0.752
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.752
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.752
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.750
irf10 Danio rerio ENSDARG00000027658 I 0.743
IRF8 Procavia capensis ENSPCAG00000004460 I 0.743
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.743
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.740
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.740
Ogr08841 Ophisaurus gracilis Ogr08841 I 0.735
ENSAMXG00000002697 Astyanax mexicanus ENSAMXG00000002697 I 0.733
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I 0.721
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.721
irf8 Danio rerio ENSDARG00000056407 I 0.721
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.719
Gfo_R005312 Geospiza fortis Gfo_R005312 I 0.719
Aan_R015695 Calypte anna Aan_R015695 I 0.719
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.714
irf8 Oryzias latipes ENSORLG00000018216 I 0.714
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.714
ENSLAFG00000030530 Loxodonta africana ENSLAFG00000030530 I 0.714
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.714
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.714
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.712
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.712
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.705
ENSMODG00000019483 Monodelphis domestica ENSMODG00000019483 I 0.705
ENSFCAG00000029870 Felis catus ENSFCAG00000029870 I 0.705
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.702