txndc15 (Gasterosteus aculeatus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGACG00000020876 T244097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF2
M05545_2.00
Homo sapiens
NGAAAVYGAAAS

STTTCRBTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX
0.721 0.721
IRF2
M02691_2.00
Homo sapiens
SGAAAGYGAAASYNWWHH

DDWWNRSTTTCRCTTTCS
SELEX
Mathelier et al.(2014)
MA0051.1
0.721 0.721
IRF2
M09237_2.00
Homo sapiens
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A
0.721 0.721
IRF2
M09596_2.00
Homo sapiens
NRAAVNRRAASB

VSTTYYNBTTYN
Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985
0.721 0.721
IRF2
M10892_2.00
Homo sapiens
GAAAAGYGAAASY

RSTTTCRCTTTTC
Transfac
Matys et al.(2006)
V$IRF2_01
0.721 0.721
IRF2
M10893_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF2_Q6
0.721 0.721
IRF2
M05546_2.00
Homo sapiens
NGAAASYGAAAS

STTTCRSTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX
0.721 0.721
Irf2
M00805_2.00
Mus musculus
NDWNHGAAAV

BTTTCDNWHN
PBM
Weirauch et al.(2013)
pTH2835
0.712 0.712
Irf2
M09245_2.00
Mus musculus
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B
0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000027603 IRF 7 111
ENSGACP00000027604 IRF 7 111

Links

Other IRF family TFs
Other Gasterosteus aculeatus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
txndc15 Oryzias latipes ENSORLG00000001131 I 0.817
ENSXMAG00000011087 Xiphophorus maculatus ENSXMAG00000011087 I 0.808
ENSONIG00000017217 Oreochromis niloticus ENSONIG00000017217 I 0.798
ENSAMXG00000010595 Astyanax mexicanus ENSAMXG00000010595 I 0.781
txndc15 Takifugu rubripes ENSTRUG00000004321 I 0.769
IRF2 Erinaceus europaeus ENSEEUG00000004690 I 0.756
txndc15 Danio rerio ENSDARG00000043249 I 0.752
ENSLOCG00000010331 Lepisosteus oculatus ENSLOCG00000010331 I 0.733
txndc15 Tetraodon nigroviridis ENSTNIG00000019636 I 0.731
IRF2 Choloepus hoffmanni ENSCHOG00000012067 I 0.725
IRF2 Pan troglodytes ENSPTRG00000016639 I 0.724
IRF2 Otolemur garnettii ENSOGAG00000010966 I 0.714
Gfo_R013143 Geospiza fortis Gfo_R013143 I 0.714
IRF2 Oryctolagus cuniculus ENSOCUG00000009229 I 0.714
Myotis_brandtii_IRF2_10027054 Myotis brandtii Myotis_brandtii_IRF2_10027054 I 0.714
ENSMPUG00000011075 Mustela putorius furo ENSMPUG00000011075 I 0.714
ENSOARG00000007443 Ovis aries ENSOARG00000007443 I 0.714
IRF2 Ochotona princeps ENSOPRG00000005398 I 0.714
ENSP00000377218 Macaca fascicularis ENSP00000377218 I 0.714
IRF2 Sus scrofa ENSSSCG00000015782 I 0.714
IRF2 Monodelphis domestica ENSMODG00000004393 I 0.714
ENSSHAG00000002124 Sarcophilus harrisii ENSSHAG00000002124 I 0.714
IRF2 Pteropus vampyrus ENSPVAG00000007078 I 0.714
IRF2 Tursiops truncatus ENSTTRG00000009391 I 0.714
ENSBTAP00000013193-D1 Bos grunniens ENSBTAP00000013193-D1 I 0.714
Aan_R011063 Calypte anna Aan_R011063 I 0.714
ENSNLEG00000010848 Nomascus leucogenys ENSNLEG00000010848 I 0.714
IRF2 Canis familiaris ENSCAFG00000007761 I 0.714
ENSFALG00000013442 Ficedula albicollis ENSFALG00000013442 I 0.714
IRF2 Felis catus ENSFCAG00000030144 I 0.714
IRF2 Macaca mulatta ENSMMUG00000015087 I 0.714
ENSCSAG00000003010 Chlorocebus sabaeus ENSCSAG00000003010 I 0.714
IRF2 Callithrix jacchus ENSCJAG00000005731 I 0.714
IRF2 Cavia porcellus ENSCPOG00000013097 I 0.714
IRF2 Bos taurus ENSBTAG00000010002 I 0.714
IRF2 Homo sapiens ENSG00000168310 D 0.714
IRF2 Microcebus murinus ENSMICG00000015506 I 0.714
IRF2 Myotis lucifugus ENSMLUG00000014246 I 0.714
ENSAMEG00000008380 Ailuropoda melanoleuca ENSAMEG00000008380 I 0.714
IRF2 Loxodonta africana ENSLAFG00000000088 I 0.714
IRF2 Gorilla gorilla ENSGGOG00000016559 I 0.714
Irf2 Rattus norvegicus ENSRNOG00000009824 I 0.712
Afo_R013359 Aptenodytes forsteri Afo_R013359 I 0.712
IRF1 Anolis carolinensis ENSACAG00000012699 I 0.712
IRF2 Equus caballus ENSECAG00000007508 I 0.712
Gfo_R010481 Geospiza fortis Gfo_R010481 I 0.705
Brh_R001640 Buceros rhinoceros Brh_R001640 I 0.705
Brh_R004433 Buceros rhinoceros Brh_R004433 I 0.705
Tal_R005926 Tyto alba Tal_R005926 I 0.705
Pvit_14395 Pogona vitticeps Pvit_14395 I 0.705
Cmyd_10017697 Chelonia mydas Cmyd_10017697 I 0.705
ENSAPLG00000015442 Anas platyrhynchos ENSAPLG00000015442 I 0.705
ENSFALG00000011727 Ficedula albicollis ENSFALG00000011727 I 0.705
ENSGMOG00000019456 Gadus morhua ENSGMOG00000019456 N 0.705
ENSLACG00000004013 Latimeria chalumnae ENSLACG00000004013 I 0.705
Irf2 Mus musculus ENSMUSG00000031627 D 0.705
IRF2 Gallus gallus ENSGALG00000010642 I 0.705
ENSPSIG00000016830 Pelodiscus sinensis ENSPSIG00000016830 I 0.705
IRF2 Vicugna pacos ENSVPAG00000011297 I 0.705
IRF2 Taeniopygia guttata ENSTGUG00000006662 I 0.705
IRF1 Gallus gallus ENSGALG00000006785 I 0.705
Aan_R004209 Calypte anna Aan_R004209 I 0.705