ENSLACG00000003594 (Latimeria chalumnae)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSLACG00000003594 T244128_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF2
M05545_2.00
Homo sapiens
NGAAAVYGAAAS

STTTCRBTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX
0.705 0.705
IRF2
M02691_2.00
Homo sapiens
SGAAAGYGAAASYNWWHH

DDWWNRSTTTCRCTTTCS
SELEX
Mathelier et al.(2014)
MA0051.1
0.705 0.705
IRF2
M09237_2.00
Homo sapiens
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A
0.705 0.705
IRF2
M09596_2.00
Homo sapiens
NRAAVNRRAASB

VSTTYYNBTTYN
Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985
0.705 0.705
IRF2
M10892_2.00
Homo sapiens
GAAAAGYGAAASY

RSTTTCRCTTTTC
Transfac
Matys et al.(2006)
V$IRF2_01
0.705 0.705
IRF2
M10893_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF2_Q6
0.705 0.705
IRF2
M05546_2.00
Homo sapiens
NGAAASYGAAAS

STTTCRSTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000004037 IRF 7 112

Links

Other IRF family TFs
Other Latimeria chalumnae TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL004174 Aedes aegypti AAEL004174 I 0.000
AAEL013504 Aedes aegypti AAEL013504 I 0.000
AALB004781 Anopheles albimanus AALB004781 I 0.000
AARA007626 Anopheles arabiensis AARA007626 I 0.000
AATE019626 Anopheles atroparvus AATE019626 I 0.000
ACHR005948 Anopheles christyi ACHR005948 I 0.000
ACOM024997 Anopheles coluzzii ACOM024997 I 0.000
ACUA013605 Anopheles culicifacies ACUA013605 I 0.000
ADAC005019 Anopheles darlingi ADAC005019 I 0.000
ADIR008855 Anopheles dirus ADIR008855 I 0.000
AEPI008783 Anopheles epiroticus AEPI008783 I 0.000
AFAF003219 Anopheles farauti AFAF003219 I 0.000
AFUN010103 Anopheles funestus AFUN010103 I 0.000
AGAP005896 Anopheles gambiae AGAP005896 I 0.000
AGAP005895 Anopheles gambiae AGAP005895 I 0.000
AMEC016175 Anopheles melas AMEC016175 I 0.000
AMEM015129 Anopheles merus AMEM015129 I 0.000
AMIN011562 Anopheles minimus AMIN011562 I 0.000
AQUA010990 Anopheles quadriannulatus AQUA010990 I 0.000
ASIS012852 Anopheles sinensis ASIS012852 I 0.000
ASTEI02809 Anopheles stephensi ASTEI02809 I 0.000
CpipJ_CPIJ004922 Culex pipiens CpipJ_CPIJ004922 I 0.000
CPIJ004922 Culex quinquefasciatus CPIJ004922 I 0.000
GF24374 Drosophila ananassae FBgn0101368 I 0.000
GF10130 Drosophila ananassae FBgn0087171 I 0.000
GF24375 Drosophila ananassae FBgn0101369 I 0.000
GG15041 Drosophila erecta FBgn0107295 I 0.000
GG14368 Drosophila erecta FBgn0106627 I 0.000
GG14369 Drosophila erecta FBgn0106628 I 0.000
GH16541 Drosophila grimshawi FBgn0124012 I 0.000
GH14955 Drosophila grimshawi FBgn0122430 I 0.000
GH16540 Drosophila grimshawi FBgn0124011 I 0.000
Doc2 Drosophila melanogaster FBgn0035956 D 0.000
Doc3 Drosophila melanogaster FBgn0035954 D 0.000
Doc1 Drosophila melanogaster FBgn0028789 I 0.000
GI11482 Drosophila mojavensis FBgn0134242 I 0.000
GI13831 Drosophila mojavensis FBgn0136585 I 0.000
GI13829 Drosophila mojavensis FBgn0136583 I 0.000
GL15033 Drosophila persimilis FBgn0152637 I 0.000
GL15034 Drosophila persimilis FBgn0152638 I 0.000
GA18682 Drosophila pseudoobscura FBgn0078682 I 0.000
GA18655 Drosophila pseudoobscura FBgn0078655 I 0.000
GA18721 Drosophila pseudoobscura FBgn0078721 I 0.000
GM24895 Drosophila sechellia FBgn0179757 I 0.000
GM25112 Drosophila sechellia FBgn0179973 I 0.000
GM25113 Drosophila sechellia FBgn0179974 I 0.000
GD14148 Drosophila simulans FBgn0185836 I 0.000
GD14149 Drosophila simulans FBgn0185837 I 0.000
GJ11695 Drosophila virilis FBgn0198949 I 0.000
GJ11697 Drosophila virilis FBgn0198951 I 0.000
GK12279 Drosophila willistoni FBgn0214289 I 0.000
GK12352 Drosophila willistoni FBgn0214362 I 0.000
GK12353 Drosophila willistoni FBgn0214363 I 0.000
GE21264 Drosophila yakuba FBgn0238533 I 0.000
GE20800 Drosophila yakuba FBgn0238094 I 0.000
GE20799 Drosophila yakuba FBgn0238093 I 0.000
LCUP005947 Lucilia cuprina LCUP005947 I 0.000
LCUP005946 Lucilia cuprina LCUP005946 I 0.000
LCUP005945 Lucilia cuprina LCUP005945 I 0.000
MESCA005219 Megaselia scalaris MESCA005219 I 0.000
MDOA003812 Musca domestica MDOA003812 I 0.000
MDOA006037 Musca domestica MDOA006037 I 0.000
MDOA015287 Musca domestica MDOA015287 I 0.000