ENSLACG00000003594 (Latimeria chalumnae)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSLACG00000003594 T244128_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF2
M05545_2.00
Homo sapiens
NGAAAVYGAAAS

STTTCRBTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX
0.705 0.705
IRF2
M02691_2.00
Homo sapiens
SGAAAGYGAAASYNWWHH

DDWWNRSTTTCRCTTTCS
SELEX
Mathelier et al.(2014)
MA0051.1
0.705 0.705
IRF2
M09237_2.00
Homo sapiens
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A
0.705 0.705
IRF2
M09596_2.00
Homo sapiens
NRAAVNRRAASB

VSTTYYNBTTYN
Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985
0.705 0.705
IRF2
M10892_2.00
Homo sapiens
GAAAAGYGAAASY

RSTTTCRCTTTTC
Transfac
Matys et al.(2006)
V$IRF2_01
0.705 0.705
IRF2
M10893_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF2_Q6
0.705 0.705
IRF2
M05546_2.00
Homo sapiens
NGAAASYGAAAS

STTTCRSTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000004037 IRF 7 112

Links

Other IRF family TFs
Other Latimeria chalumnae TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000008380 Ailuropoda melanoleuca ENSAMEG00000008380 I 0.705
ENSAPLG00000015442 Anas platyrhynchos ENSAPLG00000015442 I 0.705
ENSAMXG00000005897 Astyanax mexicanus ENSAMXG00000005897 I 0.714
IRF2 Callithrix jacchus ENSCJAG00000005731 I 0.705
IRF2 Canis familiaris ENSCAFG00000007761 I 0.705
IRF2 Cavia porcellus ENSCPOG00000013097 I 0.714
Cmyd_10017697 Chelonia mydas Cmyd_10017697 I 0.705
ENSCSAG00000003010 Chlorocebus sabaeus ENSCSAG00000003010 I 0.705
IRF2 Equus caballus ENSECAG00000007508 I 0.705
IRF2 Felis catus ENSFCAG00000030144 I 0.705
IRF2 Gallus gallus ENSGALG00000010642 I 0.705
IRF2 Gorilla gorilla ENSGGOG00000016559 I 0.705
IRF2 Homo sapiens ENSG00000168310 D 0.705
ENSLACG00000004013 Latimeria chalumnae ENSLACG00000004013 I 0.705
ENSLOCG00000009136 Lepisosteus oculatus ENSLOCG00000009136 I 0.705
IRF2 Loxodonta africana ENSLAFG00000000088 I 0.705
ENSP00000377218 Macaca fascicularis ENSP00000377218 I 0.705
IRF2 Macaca mulatta ENSMMUG00000015087 I 0.705
IRF2 Microcebus murinus ENSMICG00000015506 I 0.705
IRF2 Monodelphis domestica ENSMODG00000004393 I 0.705
ENSMPUG00000011075 Mustela putorius furo ENSMPUG00000011075 I 0.705
Myotis_brandtii_IRF2_10027054 Myotis brandtii Myotis_brandtii_IRF2_10027054 I 0.705
IRF2 Myotis lucifugus ENSMLUG00000014246 I 0.705
ENSNLEG00000010848 Nomascus leucogenys ENSNLEG00000010848 I 0.705
IRF2 Oryctolagus cuniculus ENSOCUG00000009229 I 0.705
IRF2 Otolemur garnettii ENSOGAG00000010966 I 0.705
IRF2 Pan troglodytes ENSPTRG00000016639 I 0.705
ENSPFOG00000006505 Poecilia formosa ENSPFOG00000006505 I 0.705
Pvit_12337 Pogona vitticeps Pvit_12337 I 0.724
IRF2 Pteropus vampyrus ENSPVAG00000007078 I 0.705
Irf2 Rattus norvegicus ENSRNOG00000009824 I 0.705
IRF2 Sus scrofa ENSSSCG00000015782 I 0.705
IRF2 Tursiops truncatus ENSTTRG00000009391 I 0.705
Tal_R005926 Tyto alba Tal_R005926 I 0.705
ENSXMAG00000004071 Xiphophorus maculatus ENSXMAG00000004071 I 0.705