ENSLACG00000004633 (Latimeria chalumnae)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSLACG00000004633 T244130_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.740 0.740
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.731 0.731
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.731 0.731
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.731 0.731
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.731 0.731
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.731 0.731
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.731 0.731
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.731 0.731
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.731 0.731
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.731 0.731
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.721 0.721
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.721 0.721
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.721 0.721
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.721 0.721
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.721 0.721
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.721 0.721
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.721 0.721
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.721 0.721
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.721 0.721
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.721 0.721
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.721 0.721
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.721 0.721
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000005215 IRF 11 115

Links

Other IRF family TFs
Other Latimeria chalumnae TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.779
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 0.778
irf8 Danio rerio ENSDARG00000056407 I 0.769
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.769
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.763
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.760
irf9 Oryzias latipes ENSORLG00000013335 I 0.760
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.760
irf8 Oryzias latipes ENSORLG00000018216 I 0.760
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I 0.760
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I 0.760
irf9.L Xenopus laevis XB-GENE-992442 N 0.760
Tal_R010571 Tyto alba Tal_R010571 I 0.759
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.754
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.750
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.750
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.750
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.750
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I 0.750
irf9 Gasterosteus aculeatus ENSGACG00000001697 I 0.740
Tal_R007108 Tyto alba Tal_R007108 I 0.740
IRF8 Bos taurus ENSBTAG00000017824 I 0.740
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.740
IRF8 Gallus gallus ENSGALG00000005757 I 0.740
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.740
irf9 Danio rerio ENSDARG00000016457 I 0.740
Irf8 Mus musculus ENSMUSG00000041515 D 0.740
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.740
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.740
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.740
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.740
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.740
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.740
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.740
ENSAMXG00000004911 Astyanax mexicanus ENSAMXG00000004911 I 0.740
irf8.L Xenopus laevis XB-GENE-985949 I 0.740
irf4a Takifugu rubripes ENSTRUG00000011568 I 0.733
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.731
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.731
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.731
IRF8 Canis familiaris ENSCAFG00000019919 I 0.731
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.731
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.731
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.731
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.731
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.731
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.731
irf9 Takifugu rubripes ENSTRUG00000017722 I 0.731
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.731
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.731
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.731
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.731
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.731
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.731
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.731
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.731
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.731
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.731
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.731
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.731
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.731
IRF8 Felis catus ENSFCAG00000007615 I 0.731
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.731
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.731
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.731
IRF8 Homo sapiens ENSG00000140968 D 0.731
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.731
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.731
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.731
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.731
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.731
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.731
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.731
irf4a Danio rerio ENSDARG00000006560 I 0.731
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I 0.724
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.721
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.721
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.721
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.721
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.721
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.721
IRF4 Bos taurus ENSBTAG00000002929 I 0.721
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.721
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.721
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.721
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.721
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.721
IRF4 Homo sapiens ENSG00000137265 D 0.721
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.721
irf4a Gasterosteus aculeatus ENSGACG00000016461 I 0.721
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.721
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.721
IRF4 Equus caballus ENSECAG00000016808 I 0.721
IRF4 Echinops telfairi ENSETEG00000018472 I 0.721
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.721
Aan_R012662 Calypte anna Aan_R012662 I 0.721
IRF4 Felis catus ENSFCAG00000022941 I 0.721
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.721
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.721
Aan_R009222 Calypte anna Aan_R009222 I 0.721
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.721
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.721
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.721
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.721
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.721
irf4a Oryzias latipes ENSORLG00000017242 I 0.721
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.721
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.721
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.721
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.721
Irf4 Mus musculus ENSMUSG00000021356 D 0.721
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.721
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.721
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.721
IRF8 Procavia capensis ENSPCAG00000004460 I 0.721
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.721
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.721
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.721
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.721
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.721
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.721
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.721
ENSGMOG00000002167 Gadus morhua ENSGMOG00000002167 I 0.721
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.721
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.721
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.721
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.721
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.714
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I 0.714
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.714
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.712
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I 0.712
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I 0.712
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.712
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.712
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.712
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.712
Ogr08841 Ophisaurus gracilis Ogr08841 I 0.706
irf4b Danio rerio ENSDARG00000055374 I 0.705
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.702
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.702
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.702
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I 0.702
Ogr03980 Ophisaurus gracilis Ogr03980 I 0.702
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.702
irf4b Oryzias latipes ENSORLG00000012712 I 0.702