CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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IRF5
(
Otolemur garnettii
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSOGAG00000009608
T244261_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf5
M00177_2.00
Mus musculus
NNNHGADASH
DSTHTCDNNN
PBM
Badis et al.(2009)
Irf5_3874
0.867
0.867
IRF5
M02256_2.00
Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN
PBM
Weirauch et al.(2014)
pTH9272
0.848
0.848
IRF5
M03332_2.00
Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR
SELEX
Jolma et al.(2013)
IRF5_1
0.848
0.848
IRF5
M03333_2.00
Homo sapiens
HACCGAAACYV
BRGTTTCGGTD
SELEX
Jolma et al.(2013)
IRF5_2
0.848
0.848
IRF5
M05535_2.00
Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN
SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX
0.848
0.848
IRF5
M05537_2.00
Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN
SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX
0.848
0.848
IRF5
M10884_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF5_Q3
0.848
0.848
IRF5
M05536_2.00
Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN
SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX
0.848
0.848
IRF5
M05538_2.00
Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN
SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX
0.848
0.848
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000008593
IRF
16
121
RLKPWLVAQVNSGQYPGLQWVNGEKKFFYIPWRHATRHGPSQDGDNTIFKSYTHHSDTQTTRVDEADPAKWKANLRCALNKSRDFCLFYDGPRDMPPQPYKIYEVC
Links
Other
IRF
family TFs
Other
Otolemur garnettii
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy