irf4b (Oryzias latipes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSORLG00000012712 T244297_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.943 0.943
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.943 0.943
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.943 0.943
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.943 0.943
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.943 0.943
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.943 0.943
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.943 0.943
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.943 0.943
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.943 0.943
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.943 0.943
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.943 0.943
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.933 0.933
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.933 0.933
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.771 0.771
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.771 0.771
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.771 0.771
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.771 0.771
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.771 0.771
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.771 0.771
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.771 0.771
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.771 0.771
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.771 0.771
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000015927 IRF 17 122
ENSORLP00000015931 IRF 17 122
ENSORLP00000015933 IRF 17 122

Links

Other IRF family TFs
Other Oryzias latipes TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.990
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.990
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.990
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.990
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.983
IRF4 Choloepus hoffmanni ENSCHOG00000012417 I 0.982
ENSMICG00000011721 Microcebus murinus ENSMICG00000011721 I 0.982
ENSTSYG00000006495 Tarsius syrichta ENSTSYG00000006495 I 0.982
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.981
Tal_R010571 Tyto alba Tal_R010571 I 0.966
ENSPANG00000023389 Papio anubis ENSPANG00000023389 I 0.965
irf4b Danio rerio ENSDARG00000055374 I 0.962
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.962
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.962
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.962
Aan_R012662 Calypte anna Aan_R012662 I 0.952
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.952
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.952
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.952
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.952
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.952
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.952
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.952
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.952
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.952
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.952
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.952
IRF4 Erinaceus europaeus ENSEEUG00000007703 I 0.949
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.943
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.943
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.943
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.943
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.943
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.943
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.943
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.943
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.943
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.943
ENSGMOG00000016994 Gadus morhua ENSGMOG00000016994 I 0.943
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.943
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.943
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.943
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.943
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.943
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.943
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.943
IRF4 Echinops telfairi ENSETEG00000018472 I 0.943
IRF4 Homo sapiens ENSG00000137265 D 0.943
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.943
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.943
IRF4 Felis catus ENSFCAG00000022941 I 0.943
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.943
IRF4 Bos taurus ENSBTAG00000002929 I 0.943
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.943
IRF4 Equus caballus ENSECAG00000016808 I 0.943
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.943
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.933
Irf4 Mus musculus ENSMUSG00000021356 D 0.933
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.933
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.933
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.933
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.933
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.933
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.932
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.924
irf4 Xenopus tropicalis XB-GENE-988321 I 0.924
IRF4 Ornithorhynchus anatinus ENSOANG00000006326 I 0.918
irf4a Danio rerio ENSDARG00000006560 I 0.914
IRF4 Procavia capensis ENSPCAG00000010586 I 0.898
ENSAMXG00000012775 Astyanax mexicanus ENSAMXG00000012775 I 0.886
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.876
irf4a Gasterosteus aculeatus ENSGACG00000016461 I 0.876
irf4a Oryzias latipes ENSORLG00000017242 I 0.876
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.876
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I 0.876
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.876
irf4a Takifugu rubripes ENSTRUG00000011568 I 0.867
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I 0.867
IRF8 Tursiops truncatus ENSTTRG00000016024 I 0.800
XP_002934991 Xenopus tropicalis XP_002934991 I 0.800
ENSMICG00000012090 Microcebus murinus ENSMICG00000012090 I 0.796
IRF8 Homo sapiens ENSG00000140968 D 0.795
ENSSSCG00000023184 Sus scrofa ENSSSCG00000023184 I 0.791
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.788
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.788
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.788
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.788
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.788
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.788
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.788
IRF8 Canis familiaris ENSCAFG00000019919 I 0.788
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.788
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.788
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.788
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.788
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.788
IRF8 Felis catus ENSFCAG00000007615 I 0.788
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.788
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.788
IRF8 Procavia capensis ENSPCAG00000004460 I 0.788
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.788
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.788
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.788
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.781
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.779
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.779
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.779
IRF8 Bos taurus ENSBTAG00000017824 I 0.779
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.779
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.779
Irf8 Mus musculus ENSMUSG00000041515 D 0.779
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.779
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.779
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.779
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.779
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.779
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.779
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.779
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.779
irf8.L Xenopus laevis XB-GENE-985949 I 0.779
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.779
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.769
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.769
Tal_R007108 Tyto alba Tal_R007108 I 0.769
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.769
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.769
IRF8 Gallus gallus ENSGALG00000005757 I 0.769
Aan_R009222 Calypte anna Aan_R009222 I 0.769
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.769
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.762
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.760
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.760
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.760
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.760
Ogr08841 Ophisaurus gracilis Ogr08841 I 0.755
IRF8 Vicugna pacos ENSVPAG00000006643 I 0.755
ENSSSCG00000022547 Sus scrofa ENSSSCG00000022547 I 0.754
irf10 Danio rerio ENSDARG00000027658 I 0.752
IRF8 Equus caballus ENSECAG00000015449 I 0.746
ENSAMXG00000002697 Astyanax mexicanus ENSAMXG00000002697 I 0.743
Aan_R015695 Calypte anna Aan_R015695 I 0.737
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.737
Gfo_R005312 Geospiza fortis Gfo_R005312 I 0.737
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I 0.732
irf8 Oryzias latipes ENSORLG00000018216 I 0.731
ENSAMXG00000004911 Astyanax mexicanus ENSAMXG00000004911 I 0.723
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I 0.721
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.721
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.721
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.721
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 0.714
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.714
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.714
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.712
irf8 Danio rerio ENSDARG00000056407 I 0.712
ENSSSCG00000025716 Sus scrofa ENSSSCG00000025716 I 0.712
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I 0.705
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.702
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.702
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I 0.702
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.702