IRF9 (Procavia capensis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSPCAG00000015500 T244314_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF9
M02258_2.00
Sus scrofa
WNYGAAASY

RSTTTCRNW
PBM
Weirauch et al.(2014)
pTH9287
0.874 0.874
IRF9
M02257_2.00
Ochotona princeps
DNYRAAAVND

HNBTTTYRNH
PBM
Weirauch et al.(2014)
pTH9337
0.821 0.821
Irf9
M00173_2.00
Mus musculus
NNNRAAANN

NNTTTYNNN
PBM
Badis et al.(2009)
Isgf3g_2853
0.779 0.779
Irf9
M09240_2.00
Mus musculus
GAAABHGAAAYT

ARTTTCDVTTTC
Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C
0.779 0.779
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000014476 IRF 11 108

Links

Other IRF family TFs
Other Procavia capensis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.000
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.000
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.000
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.000
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.000
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.000
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.000
mgf022906m Mimulus guttatus mgf022906m N 0.000
mgf008315m Mimulus guttatus mgf008315m N 0.000
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.000
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.000
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.000
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.000
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.000
PK02707.1 Cannabis sativa PK02707.1 N 0.000
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.000
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.000
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.000
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.000
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.000
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.000
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.000
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.000
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.000
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.000
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.000
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.000
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.000
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.000
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.000
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.000
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.000
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.000
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.000
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.000
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.000
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.000
TCM_040833 Theobroma cacao TCM_040833 N 0.000
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.000
30131.m007244 Ricinus communis 30131.m007244 N 0.000
30024.m001746 Ricinus communis 30024.m001746 N 0.000
Pm012190 Prunus mume Pm012190 N 0.000
Cla006433 Citrullus lanatus Cla006433 N 0.000
Ca_27441 Cicer arietinum Ca_27441 N 0.000
Ca_11133 Cicer arietinum Ca_11133 N 0.000
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.000
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.000
TCM_042392 Theobroma cacao TCM_042392 N 0.000
SCL3 Arabidopsis thaliana AT1G50420 N 0.000