IRF1 (Pteropus vampyrus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSPVAG00000000430 T244355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF1
M08142_2.00
Homo sapiens
RWANNGAAASYGAAASYRNNN

NNNYRSTTTCRSTTTCNNTWY
ChIP-seq
Mathelier et al.(2014)
MA0050.2
1.000 1.000
IRF1
M09233_2.00
Homo sapiens
NRAANNGAAASWGAAASHRN

NYDSTTTCWSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A
1.000 1.000
Irf1
M09242_2.00
Mus musculus
VRAANNGAAASYGAAASYVN

NBRSTTTCRSTTTCNNTTYB
Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A
1.000 1.000
IRF1
M09594_2.00
Homo sapiens
GAAASTGAAASY

RSTTTCASTTTC
Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036
1.000 1.000
IRF1
M10879_2.00
Homo sapiens
SAAAASYGAAASY

RSTTTCRSTTTTS
Transfac
Matys et al.(2006)
V$IRF1_01
1.000 1.000
IRF1
M10880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_03
1.000 1.000
IRF1
M10881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_Q5
1.000 1.000
IRF1
M10882_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_Q6
1.000 1.000
Irf2
M00805_2.00
Mus musculus
NDWNHGAAAV

BTTTCDNWHN
PBM
Weirauch et al.(2013)
pTH2835
0.800 0.800
IRF2
M05545_2.00
Homo sapiens
NGAAAVYGAAAS

STTTCRBTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX
0.800 0.800
IRF2
M02691_2.00
Homo sapiens
SGAAAGYGAAASYNWWHH

DDWWNRSTTTCRCTTTCS
SELEX
Mathelier et al.(2014)
MA0051.1
0.800 0.800
IRF2
M09237_2.00
Homo sapiens
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A
0.800 0.800
Irf2
M09245_2.00
Mus musculus
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B
0.800 0.800
IRF2
M09596_2.00
Homo sapiens
NRAAVNRRAASB

VSTTYYNBTTYN
Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985
0.800 0.800
IRF2
M10892_2.00
Homo sapiens
GAAAAGYGAAASY

RSTTTCRCTTTTC
Transfac
Matys et al.(2006)
V$IRF2_01
0.800 0.800
IRF2
M10893_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF2_Q6
0.800 0.800
IRF2
M05546_2.00
Homo sapiens
NGAAASYGAAAS

STTTCRSTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX
0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000000400 IRF 7 73

Links

Other IRF family TFs
Other Pteropus vampyrus TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000010582 Ailuropoda melanoleuca ENSAMEG00000010582 I 0.000
Alligator_sinensis_CCG010967.1 Alligator sinensis Alligator_sinensis_CCG010967.1 I 0.000
LIN28B Anolis carolinensis ENSACAG00000003957 I 0.000
ENSACAG00000017764 Anolis carolinensis ENSACAG00000017764 I 0.000
Afo_R008930 Aptenodytes forsteri Afo_R008930 I 0.000
ENSAMXG00000001573 Astyanax mexicanus ENSAMXG00000001573 I 0.000
yakA12818 Bos grunniens yakA12818 I 0.000
ENSBTAP00000053651-D1 Bos grunniens ENSBTAP00000053651-D1 I 0.000
ENSBTAP00000004196-D2 Bos grunniens ENSBTAP00000004196-D2 I 0.000
ENSBTAG00000040497 Bos taurus ENSBTAG00000040497 I 0.000
LIN28B Bos taurus ENSBTAG00000043973 I 0.000
Brh_R006709 Buceros rhinoceros Brh_R006709 I 0.000
LIN28A Callithrix jacchus ENSCJAG00000009796 I 0.000
Aan_R005866 Calypte anna Aan_R005866 I 0.000
Aan_R002277 Calypte anna Aan_R002277 I 0.000
LIN28A Canis familiaris ENSCAFG00000012488 I 0.000
Cmyd_10021069 Chelonia mydas Cmyd_10021069 I 0.000
Cmyd_10009744 Chelonia mydas Cmyd_10009744 I 0.000
ENSCSAG00000000975 Chlorocebus sabaeus ENSCSAG00000000975 I 0.000
LIN28A Dasypus novemcinctus ENSDNOG00000010710 I 0.000
LIN28B Equus caballus ENSECAG00000020994 I 0.000
LIN28A Equus caballus ENSECAG00000020267 I 0.000
LIN28B Erinaceus europaeus ENSEEUG00000003632 I 0.000
LIN28A Felis catus ENSFCAG00000012810 I 0.000
ENSFALG00000000374 Ficedula albicollis ENSFALG00000000374 I 0.000
LIN28B Gallus gallus ENSGALG00000026761 I 0.000
ENSGALG00000000388 Gallus gallus ENSGALG00000000388 I 0.000
si:ch1073-284b18.2 Gasterosteus aculeatus ENSGACG00000013893 I 0.000
Gfo_R011576 Geospiza fortis Gfo_R011576 I 0.000
LIN28A Gorilla gorilla ENSGGOG00000024918 I 0.000
LIN28A Homo sapiens ENSG00000131914 I 0.000
ENSSTOG00000004329 Ictidomys tridecemlineatus ENSSTOG00000004329 I 0.000
ENSSTOG00000002692 Ictidomys tridecemlineatus ENSSTOG00000002692 I 0.000
ENSLACG00000004053 Latimeria chalumnae ENSLACG00000004053 I 0.000
ENSLOCG00000003353 Lepisosteus oculatus ENSLOCG00000003353 I 0.000
LIN28A Loxodonta africana ENSLAFG00000017525 I 0.000
ENSP00000254231 Macaca fascicularis ENSP00000254231 I 0.000
ENSMMUG00000032211 Macaca mulatta ENSMMUG00000032211 I 0.000
ENSMEUG00000008743 Macropus eugenii ENSMEUG00000008743 I 0.000
LIN28A Meleagris gallopavo ENSMGAG00000009456 I 0.000
ENSMPUG00000015724 Mustela putorius furo ENSMPUG00000015724 I 0.000
Lin28a Mus musculus ENSMUSG00000050966 I 0.000
Myotis_brandtii_Lin28a_10029661 Myotis brandtii Myotis_brandtii_Lin28a_10029661 I 0.000
ENSMLUG00000010158 Myotis lucifugus ENSMLUG00000010158 I 0.000
LIN28B Myotis lucifugus ENSMLUG00000006883 I 0.000
ENSNLEG00000009294 Nomascus leucogenys ENSNLEG00000009294 I 0.000
LIN28A Ochotona princeps ENSOPRG00000001591 I 0.000
Ogr14286 Ophisaurus gracilis Ogr14286 I 0.000
Ogr09706 Ophisaurus gracilis Ogr09706 I 0.000
ENSOCUG00000027473 Oryctolagus cuniculus ENSOCUG00000027473 I 0.000
ENSOCUG00000027786 Oryctolagus cuniculus ENSOCUG00000027786 I 0.000
ENSOCUG00000000299 Oryctolagus cuniculus ENSOCUG00000000299 I 0.000
LIN28A Otolemur garnettii ENSOGAG00000003971 I 0.000
ENSOARG00000004614 Ovis aries ENSOARG00000004614 I 0.000
ENSOARG00000011404 Ovis aries ENSOARG00000011404 I 0.000
LIN28A Pan troglodytes ENSPTRG00000000384 I 0.000
ENSPANG00000009841 Papio anubis ENSPANG00000009841 I 0.000
ENSPSIG00000018001 Pelodiscus sinensis ENSPSIG00000018001 I 0.000
ENSPFOG00000019352 Poecilia formosa ENSPFOG00000019352 I 0.000
Pvit_17184 Pogona vitticeps Pvit_17184 I 0.000
ENSPPYG00000001684 Pongo abelii ENSPPYG00000001684 I 0.000
LIN28A Pteropus vampyrus ENSPVAG00000017267 I 0.000
Lin28a Rattus norvegicus ENSRNOG00000060320 I 0.000
ENSSHAG00000012716 Sarcophilus harrisii ENSSHAG00000012716 I 0.000
ENSSSCG00000004365 Sus scrofa ENSSSCG00000004365 I 0.000
LIN28A Sus scrofa ENSSSCG00000003557 I 0.000
ENSTGUG00000001037 Taeniopygia guttata ENSTGUG00000001037 I 0.000
lin28a Takifugu rubripes ENSTRUG00000009454 I 0.000
ENSTSYG00000006480 Tarsius syrichta ENSTSYG00000006480 I 0.000
ENSTSYG00000011513 Tarsius syrichta ENSTSYG00000011513 I 0.000
LIN28A Tursiops truncatus ENSTTRG00000005678 I 0.000
Tal_R007754 Tyto alba Tal_R007754 I 0.000
ENSVPAG00000008073 Vicugna pacos ENSVPAG00000008073 I 0.000