IRF3 (Sorex araneus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSSARG00000006248 T244376_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF3
M03331_2.00
Homo sapiens
NNRRAANGGAAACCGAAACYR

YRGTTTCGGTTTCCNTTYYNN
SELEX
Jolma et al.(2013)
IRF3_1
0.779 0.779
IRF3
M05531_2.00
Homo sapiens
DCVGTTTCSNSGAAACCGMAASN

NSTTKCGGTTTCSNSGAAACBGH
SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX
0.779 0.779
IRF3
M05533_2.00
Homo sapiens
HSGAAAVBGAAACYGAAACN

NGTTTCRGTTTCVBTTTCSD
SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX
0.779 0.779
IRF3
M09234_2.00
Homo sapiens
RRRARDGAAAVDGRAASNRA

TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B
0.779 0.779
IRF3
M10883_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF3_Q3
0.779 0.779
IRF3
M05532_2.00
Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV

BTWTYNKTTTCCDGGAAASHGM
SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX
0.779 0.779
IRF3
M05534_2.00
Homo sapiens
HGGAAABBGAAASBGAAASN

NSTTTCVSTTTCVVTTTCCD
SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX
0.779 0.779
Irf3
M00174_2.00
Mus musculus
RDWNBGMAAS

STTKCVNWHY
PBM
Badis et al.(2009)
Irf3_3985
0.740 0.740
Irf3
M09241_2.00
Mus musculus
RRRARDGAAAVDGRAASNRA

TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A
0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000005655 IRF 7 110

Links

Other IRF family TFs
Other Sorex araneus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.000
BGIOSGA036756 Oryza indica BGIOSGA036756 N 0.000
BGIOSGA036757 Oryza indica BGIOSGA036757 N 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.000
F775_02479 Aegilops tauschii F775_02479 N 0.000
F775_25840 Aegilops tauschii F775_25840 I 0.000
GRMZM2G169564 Zea mays GRMZM2G169564 N 0.000
GRMZM2G441031 Zea mays GRMZM2G441031 I 0.000
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I 0.000
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.000
LPERR11G00970 Leersia perrieri LPERR11G00970 N 0.000
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.000
LPERR12G01080 Leersia perrieri LPERR12G01080 N 0.000
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB11G10760 Oryza brachyantha OB11G10760 N 0.000
OB12G11030 Oryza brachyantha OB12G11030 N 0.000
OBART11G01100 Oryza barthii OBART11G01100 N 0.000
OBART12G00840 Oryza barthii OBART12G00840 N 0.000
OBART12G00850 Oryza barthii OBART12G00850 N 0.000
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.000
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.000
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.000
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.000
OMERI11G01570 Oryza meridionalis OMERI11G01570 N 0.000
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.000
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.000
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.000
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.000
OPUNC11G00980 Oryza punctata OPUNC11G00980 N 0.000
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.000
OPUNC12G00990 Oryza punctata OPUNC12G00990 N 0.000
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.000
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.000
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.000
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N 0.000
OS11G0117400 Oryza sativa OS11G0117400 N 0.000
OS11G0117500 Oryza sativa OS11G0117500 N 0.000
OS12G0116600 Oryza sativa OS12G0116600 N 0.000
OS12G0116700 Oryza sativa OS12G0116700 N 0.000
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.000
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.000
Pavir.J34713 Panicum virgatum Pavir.J34713 N 0.000
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.000
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.000
Sb05g001180 Sorghum bicolor Sb05g001180 N 0.000
Sb08g002570 Sorghum bicolor Sb08g002570 N 0.000
Si010764m.g Setaria italica Si010764m.g N 0.000
Si010832m.g Setaria italica Si010832m.g N 0.000
Si019098m.g Setaria italica Si019098m.g N 0.000
Si027360m.g Setaria italica Si027360m.g N 0.000
Si028202m.g Setaria italica Si028202m.g I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
TCM_045556 Theobroma cacao TCM_045556 I 0.000
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.000
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.000
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.000