CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000005711
(
Ictidomys tridecemlineatus
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSSTOG00000005711
T244396_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IRF7
M03337_2.00
Homo sapiens
HCGAAAVYGAAAVT
ABTTTCRBTTTCGD
SELEX
Jolma et al.(2013)
IRF7_1
0.875
0.875
IRF7
M03338_2.00
Homo sapiens
RAANCGAAAWTCGNTTY
RAANCGAWTTTCGNTTY
SELEX
Jolma et al.(2013)
IRF7_2
0.875
0.875
IRF7
M05547_2.00
Homo sapiens
NCGAAAVYGAAANYN
NRNTTTCRBTTTCGN
SELEX
Yin et al.(2017)
IRF7_eDBD_HT-SELEX
0.875
0.875
IRF7
M09238_2.00
Homo sapiens
RAAASYRAAW
WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_HUMAN.H11MO.0.C
0.875
0.875
IRF7
M10894_2.00
Homo sapiens
NNSGAAWNYGAAANYBDV
BHVRNTTTCRNWTTCSNN
Transfac
Matys et al.(2006)
V$IRF7_01
0.875
0.875
IRF7
M05548_2.00
Homo sapiens
NNGAAARTGAAAVYR
YRBTTTCAYTTTCNN
SELEX
Yin et al.(2017)
IRF7_eDBD_Methyl-HT-SELEX
0.875
0.875
Irf7
M02255_2.00
Mus musculus
DAHNNGAAAN
NTTTCNNDTH
PBM
Weirauch et al.(2014)
pTH3475
0.769
0.769
Irf7
M09244_2.00
Mus musculus
RAAASYRAAW
WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_MOUSE.H11MO.0.C
0.769
0.769
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000005114
IRF
13
126
LFGEWLLGEVSSGCYEGLRWLDNAHTVFRVPWKHFARKDLGEADARIFKAWAVARGRWPPNTGGGDRTPPEAEAAERAGWKTNFRCALHSTRLFRMLQDNSGDPVDPHKVYALN
Links
Other
IRF
family TFs
Other
Ictidomys tridecemlineatus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFUN008225
Anopheles funestus
AFUN008225
N
0.000
AFUN008244
Anopheles funestus
AFUN008244
N
0.000
AFUN011920
Anopheles funestus
AFUN011920
N
0.000
AMIN001923
Anopheles minimus
AMIN001923
N
0.000
BRADI1G29730
Brachypodium distachyon
BRADI1G29730
I
0.000
CapteG111479
Capitella teleta
CapteG111479
N
0.000
estExt_fgenesh1_pg.C_770024
Bigelowiella natans
estExt_fgenesh1_pg.C_770024
N
0.000
GLOINDRAFT_349538
Rhizophagus irregularis
GLOINDRAFT_349538
N
0.000
GLYMA01G28820
Glycine max
GLYMA01G28820
I
0.000
GLYMA03G08270
Glycine max
GLYMA03G08270
I
0.000
GRMZM2G024247
Zea mays
GRMZM2G024247
N
0.000
GRMZM5G834758
Zea mays
GRMZM5G834758
I
0.000
GUITHDRAFT_163519
Guillardia theta
GUITHDRAFT_163519
I
0.000
HelroG178410
Helobdella robusta
HelroG178410
N
0.000
MDP0000392251
Malus domestica
MDP0000392251
N
0.000
mgf012563m
Mimulus guttatus
mgf012563m
I
0.000
MTR_8g018100
Medicago truncatula
MTR_8g018100
N
0.000
MYCTH_2308522
Myceliophthora thermophila
MYCTH_2308522
I
0.000
Si007288m.g
Setaria italica
Si007288m.g
I
0.000
TCM_029514
Theobroma cacao
TCM_029514
N
0.000