irf10 (Tetraodon nigroviridis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTNIG00000012613 T244424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.724 0.724
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.724 0.724
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.724 0.724
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.724 0.724
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.724 0.724
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.724 0.724
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.724 0.724
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.724 0.724
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.724 0.724
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.724 0.724
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.724 0.724
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.724 0.724
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.724 0.724
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.705 0.705
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.705 0.705
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.705 0.705
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.705 0.705
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.705 0.705
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.705 0.705
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.705 0.705
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.705 0.705
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.705 0.705
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000015585 IRF 9 114

Links

Other IRF family TFs
Other Tetraodon nigroviridis TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
irf10 Takifugu rubripes ENSTRUG00000002917 I 0.943
ENSONIG00000017148 Oreochromis niloticus ENSONIG00000017148 I 0.886
irf10 Gasterosteus aculeatus ENSGACG00000015123 I 0.886
ENSXMAG00000017848 Xiphophorus maculatus ENSXMAG00000017848 N 0.886
ENSPFOG00000009490 Poecilia formosa ENSPFOG00000009490 N 0.876
irf10 Oryzias latipes ENSORLG00000011745 N 0.848
irf10 Danio rerio ENSDARG00000027658 I 0.790
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.790
ENSGMOG00000002737 Gadus morhua ENSGMOG00000002737 N 0.790
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.789
Aan_R015695 Calypte anna Aan_R015695 I 0.789
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I 0.786
ENSAMXG00000002697 Astyanax mexicanus ENSAMXG00000002697 I 0.781
Gfo_R005312 Geospiza fortis Gfo_R005312 I 0.772
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I 0.771
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.763
irf10 Xenopus tropicalis XB-GENE-1033046 I 0.762
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.762
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.762
ENSMODG00000019483 Monodelphis domestica ENSMODG00000019483 I 0.752
Tal_R010571 Tyto alba Tal_R010571 I 0.741
Cmyd_10009547 Chelonia mydas Cmyd_10009547 I 0.741
ENSPANG00000023389 Papio anubis ENSPANG00000023389 I 0.737
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.733
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.733
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.724
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.724
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.724
Irf4 Mus musculus ENSMUSG00000021356 D 0.724
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.724
ENSSHAG00000012864 Sarcophilus harrisii ENSSHAG00000012864 I 0.724
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.724
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.724
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.724
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.724
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.724
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.724
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.724
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.724
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.724
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.724
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.724
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.724
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.724
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.724
IRF4 Homo sapiens ENSG00000137265 D 0.724
Ogr04948 Ophisaurus gracilis Ogr04948 N 0.724
IRF4 Felis catus ENSFCAG00000022941 I 0.724
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.724
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.724
IRF4 Bos taurus ENSBTAG00000002929 I 0.724
IRF4 Equus caballus ENSECAG00000016808 I 0.724
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.724
IRF4 Echinops telfairi ENSETEG00000018472 I 0.724
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.724
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.724
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.721
Tal_R007108 Tyto alba Tal_R007108 I 0.721
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.721
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.721
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.721
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.721
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.721
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.721
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.721
IRF8 Gallus gallus ENSGALG00000005757 I 0.721
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.714
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.714
Aan_R012662 Calypte anna Aan_R012662 I 0.714
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.714
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.714
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.714
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.714
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.714
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.714
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.714
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.714
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.714
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.714
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.714
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.714
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.714
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.712
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.712
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.712
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.705
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.705
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.705
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.705
IRF4 Ornithorhynchus anatinus ENSOANG00000006326 I 0.705
IRF8 Bos taurus ENSBTAG00000017824 I 0.705
Irf8 Mus musculus ENSMUSG00000041515 D 0.705
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.705
IRF8 Homo sapiens ENSG00000140968 D 0.705
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.705
irf8 Oryzias latipes ENSORLG00000018216 I 0.705
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.705
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.705
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.705
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.705
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.705
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.705
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.702
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.702
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.702
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.702
IRF8 Canis familiaris ENSCAFG00000019919 I 0.702
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.702
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.702
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.702
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.702
Aan_R009222 Calypte anna Aan_R009222 I 0.702
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.702
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.702
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.702
IRF8 Felis catus ENSFCAG00000007615 I 0.702
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.702