irf10 (Takifugu rubripes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTRUG00000002917 T244431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Irf4
M00175_2.00
Mus musculus
NNNYGAWASN

NSTWTCRNNN
PBM
Badis et al.(2009)
Irf4_3476
0.721 0.721
IRF4
M03334_2.00
Homo sapiens
HCGAAACCGAAACYW

WRGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF4_1
0.721 0.721
IRF4
M05539_2.00
Homo sapiens
NYGAAACYGAAACYN

NRGTTTCRGTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX
0.721 0.721
IRF4
M07978_2.00
Homo sapiens
DNDVNNGWWVTGAVWVWN

NWBWBTCABWWCNNBHNH
ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha
0.721 0.721
IRF4
M09235_2.00
Homo sapiens
NDWDRRGGAASTGARAVH

DBTYTCASTTCCYYHWHN
Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A
0.714 0.714
Irf4
M09243_2.00
Mus musculus
NDAWVVRGAASTGARAVH

DBTYTCASTTCYBBWTHN
Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A
0.714 0.714
IRF4
M09595_2.00
Homo sapiens
HNYGAAASYD

HRSTTTCRND
Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465
0.714 0.714
IRF4
M10885_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_07
0.721 0.721
IRF4
M10886_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_08
0.721 0.721
IRF4
M10887_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5_01
0.721 0.721
IRF4
M10888_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5
0.721 0.721
IRF4
M10889_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q6
0.721 0.721
IRF4
M05540_2.00
Homo sapiens
NYGAAASYGAWASHN

NDSTWTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX
0.714 0.714
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY

RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.702 0.702
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT

AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.702 0.702
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN

NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.702 0.702
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN

NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.702 0.702
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.702 0.702
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.702 0.702
IRF8
M10890_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.702 0.702
IRF8
M10891_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.702 0.702
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN

NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.702 0.702
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD

HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000006799 IRF 13 118
ENSTRUP00000006800 IRF 9 114
ENSTRUP00000006801 IRF 9 114
ENSTRUP00000006802 IRF 9 114
ENSTRUP00000006803 IRF 9 114
ENSTRUP00000006804 IRF 1 105
ENSTRUP00000006805 IRF 9 114
ENSTRUP00000006806 IRF 9 114
ENSTRUP00000006807 IRF 9 114

Links

Other IRF family TFs
Other Takifugu rubripes TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R012662 Calypte anna Aan_R012662 I 0.712
Aan_R015695 Calypte anna Aan_R015695 I 0.807
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.807
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.712
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.712
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.712
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.712
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.712
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.712
Cmyd_10009547 Chelonia mydas Cmyd_10009547 I 0.741
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.712
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.712
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.721
ENSAMXG00000002697 Astyanax mexicanus ENSAMXG00000002697 I 0.808
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.702
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.702
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.712
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.712
ENSBTAG00000031214 Bos taurus ENSBTAG00000031214 N 0.731
ENSBTAP00000012124-D1 Bos grunniens ENSBTAP00000012124-D1 N 0.724
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.721
ENSDNOG00000030863 Dasypus novemcinctus ENSDNOG00000030863 N 0.712
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.769
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.712
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I 0.771
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.712
ENSGMOG00000002737 Gadus morhua ENSGMOG00000002737 N 0.790
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.712
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.740
ENSLAFG00000030530 Loxodonta africana ENSLAFG00000030530 I 0.705
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.712
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.817
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.714
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.712
ENSMODG00000019483 Monodelphis domestica ENSMODG00000019483 I 0.760
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.721
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.702
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.721
ENSOARG00000001815 Ovis aries ENSOARG00000001815 N 0.714
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.721
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.702
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.702
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.712
ENSONIG00000017148 Oreochromis niloticus ENSONIG00000017148 I 0.886
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.702
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.746
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.721
ENSPANG00000023389 Papio anubis ENSPANG00000023389 I 0.719
ENSPFOG00000009490 Poecilia formosa ENSPFOG00000009490 N 0.867
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.702
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.721
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I 0.786
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.721
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.712
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.702
ENSSHAG00000012864 Sarcophilus harrisii ENSSHAG00000012864 I 0.724
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.712
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.721
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.769
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.702
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.702
ENSXMAG00000017848 Xiphophorus maculatus ENSXMAG00000017848 N 0.876
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.702
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.712
Gfo_R005312 Geospiza fortis Gfo_R005312 I 0.789
irf10 Gasterosteus aculeatus ENSGACG00000015123 I 0.848
irf10 Danio rerio ENSDARG00000027658 I 0.771
irf10 Xenopus tropicalis XB-GENE-1033046 I 0.731
irf10 Oryzias latipes ENSORLG00000011745 N 0.857
irf10 Tetraodon nigroviridis ENSTNIG00000012613 I 0.943
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.712
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.721
irf4 Xenopus tropicalis XB-GENE-988321 I 0.712
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.731
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.721
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.721
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.721
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.702
IRF4 Homo sapiens ENSG00000137265 D 0.721
IRF4 Felis catus ENSFCAG00000022941 I 0.721
IRF4 Echinops telfairi ENSETEG00000018472 I 0.721
IRF4 Equus caballus ENSECAG00000016808 I 0.721
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.721
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.721
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.721
IRF4 Bos taurus ENSBTAG00000002929 I 0.721
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.721
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.721
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.721
Irf4 Mus musculus ENSMUSG00000021356 D 0.721
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.721
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.721
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.712
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.721
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.712
irf4a Danio rerio ENSDARG00000006560 I 0.705
irf4a Oryzias latipes ENSORLG00000017242 I 0.702
IRF8 Bos taurus ENSBTAG00000017824 I 0.702
irf8 Oryzias latipes ENSORLG00000018216 I 0.702
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.702
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.702
Irf8 Mus musculus ENSMUSG00000041515 D 0.702
IRF8 Homo sapiens ENSG00000140968 D 0.702
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.712
IRF8 Gallus gallus ENSGALG00000005757 I 0.712
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.702
Ogr04948 Ophisaurus gracilis Ogr04948 N 0.731
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.702
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.705
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.712
Tal_R007108 Tyto alba Tal_R007108 I 0.712
Tal_R010571 Tyto alba Tal_R010571 I 0.724