Afo_R010468 (Aptenodytes forsteri)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Afo_R010468 T244501_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY

RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.789 0.789
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT

AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.789 0.789
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN

NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.789 0.789
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN

NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.789 0.789
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.789 0.789
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.789 0.789
IRF8
M10890_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.789 0.789
IRF8
M10891_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.789 0.789
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN

NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.789 0.789
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD

HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.789 0.789
Irf4
M00175_2.00
Mus musculus
NNNYGAWASN

NSTWTCRNNN
PBM
Badis et al.(2009)
Irf4_3476
0.754 0.754
IRF4
M03334_2.00
Homo sapiens
HCGAAACCGAAACYW

WRGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF4_1
0.754 0.754
IRF4
M05539_2.00
Homo sapiens
NYGAAACYGAAACYN

NRGTTTCRGTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX
0.754 0.754
IRF4
M07978_2.00
Homo sapiens
DNDVNNGWWVTGAVWVWN

NWBWBTCABWWCNNBHNH
ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha
0.754 0.754
IRF4
M09235_2.00
Homo sapiens
NDWDRRGGAASTGARAVH

DBTYTCASTTCCYYHWHN
Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A
0.754 0.754
Irf4
M09243_2.00
Mus musculus
NDAWVVRGAASTGARAVH

DBTYTCASTTCYBBWTHN
Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A
0.754 0.754
IRF4
M09595_2.00
Homo sapiens
HNYGAAASYD

HRSTTTCRND
Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465
0.754 0.754
IRF4
M10885_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_07
0.754 0.754
IRF4
M10886_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_08
0.754 0.754
IRF4
M10887_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5_01
0.754 0.754
IRF4
M10888_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5
0.754 0.754
IRF4
M10889_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q6
0.754 0.754
IRF4
M05540_2.00
Homo sapiens
NYGAAASYGAWASHN

NDSTWTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX
0.754 0.754
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R010468 IRF 1 57

Links

Other IRF family TFs
Other Aptenodytes forsteri TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYBL1 Homo sapiens ENSG00000185697 D 0.000
Myb Mus musculus ENSMUSG00000019982 D 0.000
Mybl1 Mus musculus ENSMUSG00000025912 D 0.000
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D 0.000
MYB Homo sapiens ENSG00000118513 D 0.000
MYB Taeniopygia guttata ENSTGUG00000011495 I 0.000
MYBL1 Taeniopygia guttata ENSTGUG00000011289 I 0.000
MYB Procavia capensis ENSPCAG00000009197 I 0.000
ENSTGUG00000004426 Taeniopygia guttata ENSTGUG00000004426 I 0.000
MYB Tupaia belangeri ENSTBEG00000016454 I 0.000
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I 0.000
mybl1 Tetraodon nigroviridis ENSTNIG00000010104 I 0.000
myb Tetraodon nigroviridis ENSTNIG00000016319 I 0.000
mybl1 Takifugu rubripes ENSTRUG00000008816 I 0.000
myb Takifugu rubripes ENSTRUG00000016069 I 0.000
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I 0.000
MYB Tursiops truncatus ENSTTRG00000003718 I 0.000
MYBL1 Tursiops truncatus ENSTTRG00000017138 I 0.000
MYBL1 Vicugna pacos ENSVPAG00000004194 I 0.000
ENSXMAG00000001658 Xiphophorus maculatus ENSXMAG00000001658 I 0.000
ENSSTOG00000006634 Ictidomys tridecemlineatus ENSSTOG00000006634 I 0.000
MYB Sus scrofa ENSSSCG00000004167 I 0.000
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I 0.000
ENSPFOG00000005169 Poecilia formosa ENSPFOG00000005169 I 0.000
ENSPFOG00000011241 Poecilia formosa ENSPFOG00000011241 I 0.000
ENSPMAG00000000117 Petromyzon marinus ENSPMAG00000000117 I 0.000
ENSPMAG00000001639 Petromyzon marinus ENSPMAG00000001639 I 0.000
ENSPPYG00000017028 Pongo abelii ENSPPYG00000017028 I 0.000
ENSPPYG00000018640 Pongo abelii ENSPPYG00000018640 I 0.000
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I 0.000
ENSPSIG00000011935 Pelodiscus sinensis ENSPSIG00000011935 I 0.000
MYB Pan troglodytes ENSPTRG00000018631 I 0.000
MYBL1 Pan troglodytes ENSPTRG00000020308 I 0.000
MYB Pteropus vampyrus ENSPVAG00000007652 I 0.000
Mybl1 Rattus norvegicus ENSRNOG00000021669 I 0.000
Myb Rattus norvegicus ENSRNOG00000055858 I 0.000
MYB Sorex araneus ENSSARG00000002855 I 0.000
MYBL1 Sorex araneus ENSSARG00000006938 I 0.000
ENSSHAG00000010559 Sarcophilus harrisii ENSSHAG00000010559 I 0.000
ENSXMAG00000004392 Xiphophorus maculatus ENSXMAG00000004392 I 0.000
NEMVEDRAFT_v1g38726 Nematostella vectensis NEMVEDRAFT_v1g38726 I 0.000
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I 0.000
Myotis_brandtii_MYBL1_10031628 Myotis brandtii Myotis_brandtii_MYBL1_10031628 I 0.000
Ogr00471 Ophisaurus gracilis Ogr00471 I 0.000
Ogr08782 Ophisaurus gracilis Ogr08782 I 0.000
Pvit_15001 Pogona vitticeps Pvit_15001 I 0.000
Pvit_17294 Pogona vitticeps Pvit_17294 I 0.000
Tal_R003498 Tyto alba Tal_R003498 I 0.000
Tal_R007653 Tyto alba Tal_R007653 I 0.000
Tal_R007942 Tyto alba Tal_R007942 I 0.000
estExt_fgenesh2_pg.C_1220082 Branchiostoma floridae estExt_fgenesh2_pg.C_1220082 I 0.000
estExt_fgenesh2_pg.C_1220090 Branchiostoma floridae estExt_fgenesh2_pg.C_1220090 I 0.000
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I 0.000
myb Xenopus tropicalis XB-GENE-867553 I 0.000
myb.S Xenopus laevis XB-GENE-867566 I 0.000
mybl1 Xenopus tropicalis XB-GENE-986560 I 0.000
mybl1.L Xenopus laevis XB-GENE-986561 I 0.000
Gfo_R006432 Geospiza fortis Gfo_R006432 I 0.000
Gfo_R005427 Geospiza fortis Gfo_R005427 I 0.000
Gfo_R002003 Geospiza fortis Gfo_R002003 I 0.000
SMAR001262 Strigamia maritima SMAR001262 I 0.000
Aan_R003280 Calypte anna Aan_R003280 I 0.000
Aan_R009776 Calypte anna Aan_R009776 I 0.000
Aan_R014924 Calypte anna Aan_R014924 I 0.000
Afo_R009791 Aptenodytes forsteri Afo_R009791 I 0.000
Afo_R010364 Aptenodytes forsteri Afo_R010364 I 0.000
Afo_R014904 Aptenodytes forsteri Afo_R014904 I 0.000
Alligator_sinensis_CCG001232.1 Alligator sinensis Alligator_sinensis_CCG001232.1 I 0.000
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I 0.000
Brh_R005747 Buceros rhinoceros Brh_R005747 I 0.000
Brh_R006404 Buceros rhinoceros Brh_R006404 I 0.000
Brh_R006445 Buceros rhinoceros Brh_R006445 I 0.000
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I 0.000
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I 0.000
ENSP00000339992 Macaca fascicularis ENSP00000339992 I 0.000
ENSP00000385360 Macaca fascicularis ENSP00000385360 I 0.000
XP_002935855 Xenopus tropicalis XP_002935855 I 0.000
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I 0.000
MYB Anolis carolinensis ENSACAG00000009861 I 0.000
mybl1 Danio rerio ENSDARG00000030999 I 0.000
mybl2b Danio rerio ENSDARG00000032264 I 0.000
myb Danio rerio ENSDARG00000053666 I 0.000
MYBL1 Dasypus novemcinctus ENSDNOG00000016860 I 0.000
MYB Dasypus novemcinctus ENSDNOG00000047370 I 0.000
MYB Equus caballus ENSECAG00000009918 I 0.000
MYBL1 Equus caballus ENSECAG00000015959 I 0.000
MYB Erinaceus europaeus ENSEEUG00000001468 I 0.000
MYBL1 Echinops telfairi ENSETEG00000009840 I 0.000
ENSFALG00000005444 Ficedula albicollis ENSFALG00000005444 I 0.000
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I 0.000
MYB Felis catus ENSFCAG00000001812 I 0.000
MYBL1 Felis catus ENSFCAG00000031398 I 0.000
mybl1 Gasterosteus aculeatus ENSGACG00000002964 I 0.000
myb Gasterosteus aculeatus ENSGACG00000011054 I 0.000
MYBL2 Gallus gallus ENSGALG00000003503 I 0.000
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I 0.000
ENSCSAG00000014195 Chlorocebus sabaeus ENSCSAG00000014195 I 0.000
MYBL1 Anolis carolinensis ENSACAG00000016577 I 0.000
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I 0.000
ENSAMEG00000012401 Ailuropoda melanoleuca ENSAMEG00000012401 I 0.000
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I 0.000
ENSAMXG00000013759 Astyanax mexicanus ENSAMXG00000013759 I 0.000
ENSAPLG00000005213 Anas platyrhynchos ENSAPLG00000005213 I 0.000
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I 0.000
ENSAPLG00000014596 Anas platyrhynchos ENSAPLG00000014596 I 0.000
MYB Bos taurus ENSBTAG00000012074 I 0.000
MYB Canis familiaris ENSCAFG00000000230 I 0.000
MYBL1 Canis familiaris ENSCAFG00000007344 I 0.000
MYB Choloepus hoffmanni ENSCHOG00000010472 I 0.000
MYBL1 Callithrix jacchus ENSCJAG00000004466 I 0.000
MYB Callithrix jacchus ENSCJAG00000007798 I 0.000
MYBL1 Cavia porcellus ENSCPOG00000007578 I 0.000
MYB Cavia porcellus ENSCPOG00000014607 I 0.000
MYB Gallus gallus ENSGALG00000013956 I 0.000
ENSGALG00000015522 Gallus gallus ENSGALG00000015522 I 0.000
MYB Gorilla gorilla ENSGGOG00000001379 I 0.000
MYB Monodelphis domestica ENSMODG00000017488 I 0.000
ENSMPUG00000014814 Mustela putorius furo ENSMPUG00000014814 I 0.000
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I 0.000
MYBL1 Ornithorhynchus anatinus ENSOANG00000002308 I 0.000
MYB Ornithorhynchus anatinus ENSOANG00000002777 I 0.000
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I 0.000
ENSOARG00000017663 Ovis aries ENSOARG00000017663 I 0.000
MYB Oryctolagus cuniculus ENSOCUG00000011633 I 0.000
MYBL1 Oryctolagus cuniculus ENSOCUG00000015184 I 0.000
MYB Otolemur garnettii ENSOGAG00000000056 I 0.000
MYBL1 Otolemur garnettii ENSOGAG00000004344 I 0.000
ENSONIG00000000469 Oreochromis niloticus ENSONIG00000000469 I 0.000
ENSONIG00000014188 Oreochromis niloticus ENSONIG00000014188 I 0.000
MYB Ochotona princeps ENSOPRG00000013639 I 0.000
mybl1 Oryzias latipes ENSORLG00000008488 I 0.000
myb Oryzias latipes ENSORLG00000016573 I 0.000
MYBL1 Monodelphis domestica ENSMODG00000007964 I 0.000
MYB Macaca mulatta ENSMMUG00000018166 I 0.000
MYBL1 Gorilla gorilla ENSGGOG00000003892 I 0.000
ENSGMOG00000011856 Gadus morhua ENSGMOG00000011856 I 0.000
ENSGMOG00000017106 Gadus morhua ENSGMOG00000017106 I 0.000
ENSLACG00000002813 Latimeria chalumnae ENSLACG00000002813 I 0.000
ENSLACG00000011097 Latimeria chalumnae ENSLACG00000011097 I 0.000
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I 0.000
MYBL1 Loxodonta africana ENSLAFG00000004821 I 0.000
MYB Loxodonta africana ENSLAFG00000018350 I 0.000
ENSLOCG00000004709 Lepisosteus oculatus ENSLOCG00000004709 I 0.000
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I 0.000
MYBL2 Meleagris gallopavo ENSMGAG00000002972 I 0.000
MYB Meleagris gallopavo ENSMGAG00000013053 I 0.000
MYB Microcebus murinus ENSMICG00000005531 I 0.000
MYB Myotis lucifugus ENSMLUG00000002125 I 0.000
MYBL1 Myotis lucifugus ENSMLUG00000003166 I 0.000
MYBL1 Macaca mulatta ENSMMUG00000013974 I 0.000
ENSPANG00000008051 Papio anubis ENSPANG00000008051 I 0.000