ENSP00000329411-D1 (Bos grunniens)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 ENSP00000329411-D1 T244537_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF7
M03337_2.00
Homo sapiens
HCGAAAVYGAAAVT

ABTTTCRBTTTCGD
SELEX
Jolma et al.(2013)
IRF7_1
0.827 0.827
IRF7
M03338_2.00
Homo sapiens
RAANCGAAAWTCGNTTY

RAANCGAWTTTCGNTTY
SELEX
Jolma et al.(2013)
IRF7_2
0.827 0.827
IRF7
M05547_2.00
Homo sapiens
NCGAAAVYGAAANYN

NRNTTTCRBTTTCGN
SELEX
Yin et al.(2017)
IRF7_eDBD_HT-SELEX
0.827 0.827
IRF7
M09238_2.00
Homo sapiens
RAAASYRAAW

WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_HUMAN.H11MO.0.C
0.827 0.827
IRF7
M10894_2.00
Homo sapiens
NNSGAAWNYGAAANYBDV

BHVRNTTTCRNWTTCSNN
Transfac
Matys et al.(2006)
V$IRF7_01
0.827 0.827
IRF7
M05548_2.00
Homo sapiens
NNGAAARTGAAAVYR

YRBTTTCAYTTTCNN
SELEX
Yin et al.(2017)
IRF7_eDBD_Methyl-HT-SELEX
0.827 0.827
Irf7
M02255_2.00
Mus musculus
DAHNNGAAAN

NTTTCNNDTH
PBM
Weirauch et al.(2014)
pTH3475
0.721 0.721
Irf7
M09244_2.00
Mus musculus
RAAASYRAAW

WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_MOUSE.H11MO.0.C
0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000329411-D1 IRF 28 140

Links

Other IRF family TFs
Other Bos grunniens TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
4357_Multiple Saccharomyces mikatae 4357_Multiple N 0.000
5134_YDR359C Saccharomyces bayanus 5134_YDR359C N 0.000
AACERI_AaceriAER244C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER244C N 0.000
AGOS_AER244C Ashbya gossypii AGOS_AER244C N 0.000
Ecym_5517 Eremothecium cymbalariae Ecym_5517 N 0.000
KAFR_0E03980 Kazachstania africana KAFR_0E03980 N 0.000
Kpol_1031p18 Vanderwaltozyma polyspora Kpol_1031p18 N 0.000
NCAS_0F03250 Naumovozyma castellii NCAS_0F03250 N 0.000
NDAI_0B05550 Naumovozyma dairenensis NDAI_0B05550 N 0.000
Scas_Contig658.9 Saccharomyces castellii Scas_Contig658.9 N 0.000
TDEL_0E02070 Torulaspora delbrueckii TDEL_0E02070 N 0.000
EAF1 Saccharomyces cerevisiae YDR359C N 0.000
ZYRO0F09636g Zygosaccharomyces rouxii ZYRO0F09636g N 0.000