|
ENSP00000384406
(Macaca fascicularis)
IRF
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00605 (IRF) |
IPR001346 |
ENSP00000384406 |
T244547_2.00 |
GigaDB (2015-Oct-22) |
NCBI Gene Info:The protein encoded by this gene is a transcriptional regulator and tumor suppressor, serving as an activator of genes involved in both innate and acquired immune responses. The encoded protein activates the transcription of genes involved in the body's response to viruses and bacteria, playing a role in cell proliferation, apoptosis, the immune response, and DNA damage response. This protein represses the transcription of several other genes. As a tumor suppressor, it both suppresses tumor cell growth and stimulates an immune response against tumor cells. Defects in this gene have been associated with gastric cancer, myelogenous leukemia, and lung cancer. [provided by RefSeq, Aug 2017] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
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|
|
|
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Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
IRF1
M08142_2.00 |
Homo sapiens |
RWANNGAAASYGAAASYRNNN |
NNNYRSTTTCRSTTTCNNTWY |
ChIP-seq
Mathelier et al.(2014)
MA0050.2
|
1.000
|
1.000
|
IRF1
M09233_2.00 |
Homo sapiens |
NRAANNGAAASWGAAASHRN |
NYDSTTTCWSTTTCNNTTYN |
Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A
|
1.000
|
1.000
|
Irf1
M09242_2.00 |
Mus musculus |
VRAANNGAAASYGAAASYVN |
NBRSTTTCRSTTTCNNTTYB |
Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A
|
1.000
|
1.000
|
IRF1
M09594_2.00 |
Homo sapiens |
GAAASTGAAASY |
RSTTTCASTTTC |
Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036
|
1.000
|
1.000
|
IRF1
M10879_2.00 |
Homo sapiens |
SAAAASYGAAASY |
RSTTTCRSTTTTS |
Transfac
Matys et al.(2006)
V$IRF1_01
|
1.000
|
1.000
|
IRF1
M10880_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IRF1_03
|
1.000
|
1.000
|
IRF1
M10881_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IRF1_Q5
|
1.000
|
1.000
|
IRF1
M10882_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IRF1_Q6
|
1.000
|
1.000
|
Irf2
M00805_2.00 |
Mus musculus |
NDWNHGAAAV |
BTTTCDNWHN |
PBM
Weirauch et al.(2013)
pTH2835
|
0.771
|
0.771
|
IRF2
M05545_2.00 |
Homo sapiens |
NGAAAVYGAAAS |
STTTCRBTTTCN |
SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX
|
0.771
|
0.771
|
IRF2
M02691_2.00 |
Homo sapiens |
SGAAAGYGAAASYNWWHH |
DDWWNRSTTTCRCTTTCS |
SELEX
Mathelier et al.(2014)
MA0051.1
|
0.771
|
0.771
|
IRF2
M09237_2.00 |
Homo sapiens |
NRAANNGAAASYGAAASYRV |
BYRSTTTCRSTTTCNNTTYN |
Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A
|
0.771
|
0.771
|
Irf2
M09245_2.00 |
Mus musculus |
NRAANNGAAASYGAAASYRV |
BYRSTTTCRSTTTCNNTTYN |
Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B
|
0.771
|
0.771
|
IRF2
M09596_2.00 |
Homo sapiens |
NRAAVNRRAASB |
VSTTYYNBTTYN |
Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985
|
0.771
|
0.771
|
IRF2
M10892_2.00 |
Homo sapiens |
GAAAAGYGAAASY |
RSTTTCRCTTTTC |
Transfac
Matys et al.(2006)
V$IRF2_01
|
0.771
|
0.771
|
IRF2
M10893_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IRF2_Q6
|
0.771
|
0.771
|
IRF2
M05546_2.00 |
Homo sapiens |
NGAAASYGAAAS |
STTTCRSTTTCN |
SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX
|
0.771
|
0.771
|
For this family, TFs with SR scores > 0.700 will likely have a similar motif |