Ogr17358 (Ophisaurus gracilis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Ogr17358 T244571_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF2
M05545_2.00
Homo sapiens
NGAAAVYGAAAS

STTTCRBTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX
0.943 0.943
IRF2
M02691_2.00
Homo sapiens
SGAAAGYGAAASYNWWHH

DDWWNRSTTTCRCTTTCS
SELEX
Mathelier et al.(2014)
MA0051.1
0.943 0.943
IRF2
M09237_2.00
Homo sapiens
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A
0.943 0.943
IRF2
M09596_2.00
Homo sapiens
NRAAVNRRAASB

VSTTYYNBTTYN
Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985
0.943 0.943
IRF2
M10892_2.00
Homo sapiens
GAAAAGYGAAASY

RSTTTCRCTTTTC
Transfac
Matys et al.(2006)
V$IRF2_01
0.943 0.943
IRF2
M10893_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF2_Q6
0.943 0.943
IRF2
M05546_2.00
Homo sapiens
NGAAASYGAAAS

STTTCRSTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX
0.943 0.943
Irf2
M00805_2.00
Mus musculus
NDWNHGAAAV

BTTTCDNWHN
PBM
Weirauch et al.(2013)
pTH2835
0.924 0.924
Irf2
M09245_2.00
Mus musculus
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B
0.924 0.924
IRF1
M08142_2.00
Homo sapiens
RWANNGAAASYGAAASYRNNN

NNNYRSTTTCRSTTTCNNTWY
ChIP-seq
Mathelier et al.(2014)
MA0050.2
0.752 0.752
IRF1
M09233_2.00
Homo sapiens
NRAANNGAAASWGAAASHRN

NYDSTTTCWSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A
0.752 0.752
Irf1
M09242_2.00
Mus musculus
VRAANNGAAASYGAAASYVN

NBRSTTTCRSTTTCNNTTYB
Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A
0.752 0.752
IRF1
M09594_2.00
Homo sapiens
GAAASTGAAASY

RSTTTCASTTTC
Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036
0.752 0.752
IRF1
M10879_2.00
Homo sapiens
SAAAASYGAAASY

RSTTTCRSTTTTS
Transfac
Matys et al.(2006)
V$IRF1_01
0.752 0.752
IRF1
M10880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_03
0.752 0.752
IRF1
M10881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_Q5
0.752 0.752
IRF1
M10882_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_Q6
0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr17358 IRF 7 112

Links

Other IRF family TFs
Other Ophisaurus gracilis TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG007907.1 Alligator sinensis Alligator_sinensis_CCG007907.1 N 0.000
ENSBTAG00000005098 Bos taurus ENSBTAG00000005098 N 0.000
HMGB1 Bos taurus ENSBTAG00000014862 N 0.000
ENSBTAG00000015315 Bos taurus ENSBTAG00000015315 N 0.000
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N 0.000
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.000
ENSBTAP00000049034-D1 Bos grunniens ENSBTAP00000049034-D1 N 0.000
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N 0.000
ENSBTAP00000052990-D1 Bos grunniens ENSBTAP00000052990-D1 N 0.000
ENSCJAG00000003900 Callithrix jacchus ENSCJAG00000003900 N 0.000
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.000
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.000
ENSCJAG00000007594 Callithrix jacchus ENSCJAG00000007594 N 0.000
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.000
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.000
ENSCJAG00000011146 Callithrix jacchus ENSCJAG00000011146 N 0.000
ENSCJAG00000014197 Callithrix jacchus ENSCJAG00000014197 N 0.000
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.000
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.000
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.000
ENSCJAG00000033913 Callithrix jacchus ENSCJAG00000033913 N 0.000
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.000
ENSCSAG00000001500 Chlorocebus sabaeus ENSCSAG00000001500 N 0.000
ENSCSAG00000010707 Chlorocebus sabaeus ENSCSAG00000010707 N 0.000
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.000
ENSCSAG00000015385 Chlorocebus sabaeus ENSCSAG00000015385 N 0.000
hmgb2a Danio rerio ENSDARG00000029722 N 0.000
hmgb1a Danio rerio ENSDARG00000099175 N 0.000
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.000
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N 0.000
ENSDNOG00000047452 Dasypus novemcinctus ENSDNOG00000047452 N 0.000
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N 0.000
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.000
ENSETEG00000013458 Echinops telfairi ENSETEG00000013458 N 0.000
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.000
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.000
ENSGGOG00000025769 Gorilla gorilla ENSGGOG00000025769 N 0.000
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.000
ENSLAFG00000030388 Loxodonta africana ENSLAFG00000030388 N 0.000
ENSMEUG00000009480 Macropus eugenii ENSMEUG00000009480 N 0.000
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.000
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.000
ENSMICG00000010120 Microcebus murinus ENSMICG00000010120 N 0.000
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.000
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N 0.000
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.000
ENSMMUG00000007761 Macaca mulatta ENSMMUG00000007761 N 0.000
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N 0.000
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.000
ENSMMUP00000010196 Macaca fascicularis ENSMMUP00000010196 N 0.000
ENSMMUP00000039817 Macaca fascicularis ENSMMUP00000039817 N 0.000
HMGB1 Monodelphis domestica ENSMODG00000004443 N 0.000
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.000
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.000
ENSMPUG00000020113 Mustela putorius furo ENSMPUG00000020113 N 0.000
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N 0.000
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.000
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.000
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.000
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.000
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.000
ENSOARG00000019147 Ovis aries ENSOARG00000019147 N 0.000
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.000
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N 0.000
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.000
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.000
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.000
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.000
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N 0.000
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N 0.000
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N 0.000
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.000
ENSOGAG00000029272 Otolemur garnettii ENSOGAG00000029272 N 0.000
ENSOGAG00000029748 Otolemur garnettii ENSOGAG00000029748 N 0.000
ENSOGAG00000030052 Otolemur garnettii ENSOGAG00000030052 N 0.000
ENSOGAG00000031959 Otolemur garnettii ENSOGAG00000031959 N 0.000
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.000
ENSOGAG00000032240 Otolemur garnettii ENSOGAG00000032240 N 0.000
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N 0.000
ENSOGAG00000033550 Otolemur garnettii ENSOGAG00000033550 N 0.000
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.000
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.000
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.000
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.000
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.000
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.000
ENSPANG00000020000 Papio anubis ENSPANG00000020000 N 0.000
ENSPANG00000023341 Papio anubis ENSPANG00000023341 N 0.000
ENSPANG00000025478 Papio anubis ENSPANG00000025478 N 0.000
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.000
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.000
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.000
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.000
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.000
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.000
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.000
AABR07019870.1 Rattus norvegicus ENSRNOG00000038033 N 0.000
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N 0.000
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N 0.000
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N 0.000
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.000
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.000
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.000
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.000
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.000
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.000
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.000
ENSTBEG00000005706 Tupaia belangeri ENSTBEG00000005706 N 0.000
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N 0.000
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.000
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N 0.000
ENSTBEG00000015340 Tupaia belangeri ENSTBEG00000015340 N 0.000
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N 0.000
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.000
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.000
ENSTSYG00000012587 Tarsius syrichta ENSTSYG00000012587 N 0.000
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.000
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.000
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.000
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.000
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.000
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.000