Pvit_12337 (Pogona vitticeps)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Pvit_12337 T244576_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF2
M05545_2.00
Homo sapiens
NGAAAVYGAAAS

STTTCRBTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX
0.952 0.952
IRF2
M02691_2.00
Homo sapiens
SGAAAGYGAAASYNWWHH

DDWWNRSTTTCRCTTTCS
SELEX
Mathelier et al.(2014)
MA0051.1
0.952 0.952
IRF2
M09237_2.00
Homo sapiens
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A
0.952 0.952
IRF2
M09596_2.00
Homo sapiens
NRAAVNRRAASB

VSTTYYNBTTYN
Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985
0.952 0.952
IRF2
M10892_2.00
Homo sapiens
GAAAAGYGAAASY

RSTTTCRCTTTTC
Transfac
Matys et al.(2006)
V$IRF2_01
0.952 0.952
IRF2
M10893_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF2_Q6
0.952 0.952
IRF2
M05546_2.00
Homo sapiens
NGAAASYGAAAS

STTTCRSTTTCN
SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX
0.952 0.952
Irf2
M00805_2.00
Mus musculus
NDWNHGAAAV

BTTTCDNWHN
PBM
Weirauch et al.(2013)
pTH2835
0.933 0.933
Irf2
M09245_2.00
Mus musculus
NRAANNGAAASYGAAASYRV

BYRSTTTCRSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B
0.933 0.933
IRF1
M08142_2.00
Homo sapiens
RWANNGAAASYGAAASYRNNN

NNNYRSTTTCRSTTTCNNTWY
ChIP-seq
Mathelier et al.(2014)
MA0050.2
0.752 0.752
IRF1
M09233_2.00
Homo sapiens
NRAANNGAAASWGAAASHRN

NYDSTTTCWSTTTCNNTTYN
Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A
0.752 0.752
Irf1
M09242_2.00
Mus musculus
VRAANNGAAASYGAAASYVN

NBRSTTTCRSTTTCNNTTYB
Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A
0.752 0.752
IRF1
M09594_2.00
Homo sapiens
GAAASTGAAASY

RSTTTCASTTTC
Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036
0.752 0.752
IRF1
M10879_2.00
Homo sapiens
SAAAASYGAAASY

RSTTTCRSTTTTS
Transfac
Matys et al.(2006)
V$IRF1_01
0.752 0.752
IRF1
M10880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_03
0.752 0.752
IRF1
M10881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_Q5
0.752 0.752
IRF1
M10882_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF1_Q6
0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_12337 IRF 7 112

Links

Other IRF family TFs
Other Pogona vitticeps TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Snai1 Mus musculus ENSMUSG00000042821 D 0.000
SNAI1 Homo sapiens ENSG00000124216 D 0.000
SNAI1 Pan troglodytes ENSPTRG00000013614 I 0.000
ENSPFOG00000015709 Poecilia formosa ENSPFOG00000015709 I 0.000
SNAI1 Procavia capensis ENSPCAG00000011934 I 0.000
snai3 Xenopus tropicalis XB-GENE-488030 I 0.000
ENSPANG00000007536 Papio anubis ENSPANG00000007536 I 0.000
ENSONIG00000020305 Oreochromis niloticus ENSONIG00000020305 I 0.000
SNAI1 Otolemur garnettii ENSOGAG00000030111 I 0.000
SNAI1 Oryctolagus cuniculus ENSOCUG00000005422 I 0.000
SNAI1 Pteropus vampyrus ENSPVAG00000004119 I 0.000
Snai1 Rattus norvegicus ENSRNOG00000009594 I 0.000
Myotis_brandtii_SNAI1_10026379 Myotis brandtii Myotis_brandtii_SNAI1_10026379 I 0.000
Myotis_brandtii_SNAI1_10026057 Myotis brandtii Myotis_brandtii_SNAI1_10026057 I 0.000
ENSBTAP00000019345-D1 Bos grunniens ENSBTAP00000019345-D1 I 0.000
ENSXMAG00000009637 Xiphophorus maculatus ENSXMAG00000009637 I 0.000
SNAI1 Tursiops truncatus ENSTTRG00000002029 I 0.000
snai1a Takifugu rubripes ENSTRUG00000012293 I 0.000
snai1a Tetraodon nigroviridis ENSTNIG00000007311 I 0.000
SNAI1 Tupaia belangeri ENSTBEG00000012262 I 0.000
ENSSTOG00000005866 Ictidomys tridecemlineatus ENSSTOG00000005866 I 0.000
ENSOARG00000013174 Ovis aries ENSOARG00000013174 I 0.000
ENSNLEG00000006985 Nomascus leucogenys ENSNLEG00000006985 I 0.000
SNAI1 Loxodonta africana ENSLAFG00000030265 I 0.000
ENSDNOG00000024891 Dasypus novemcinctus ENSDNOG00000024891 I 0.000
SNAI1 Dasypus novemcinctus ENSDNOG00000023834 I 0.000
snai1a Danio rerio ENSDARG00000056995 I 0.000
ENSCSAG00000015065 Chlorocebus sabaeus ENSCSAG00000015065 I 0.000
SNAI1 Cavia porcellus ENSCPOG00000026663 I 0.000
SNAI1 Callithrix jacchus ENSCJAG00000000518 I 0.000
SNAI1 Canis familiaris ENSCAFG00000011499 I 0.000
SNAI1 Bos taurus ENSBTAG00000014554 I 0.000
SNAI1 Equus caballus ENSECAG00000009787 I 0.000
ENSETEG00000016371 Echinops telfairi ENSETEG00000016371 I 0.000
ENSMPUG00000017558 Mustela putorius furo ENSMPUG00000017558 I 0.000
ENSMMUG00000019719 Macaca mulatta ENSMMUG00000019719 I 0.000
ENSMLUG00000015053 Myotis lucifugus ENSMLUG00000015053 I 0.000
ENSMICG00000011160 Microcebus murinus ENSMICG00000011160 I 0.000
ENSGMOG00000017815 Gadus morhua ENSGMOG00000017815 I 0.000
SNAI1 Gorilla gorilla ENSGGOG00000024422 I 0.000
snai1a Gasterosteus aculeatus ENSGACG00000010147 I 0.000
SNAI1 Felis catus ENSFCAG00000010558 I 0.000
ENSAMEG00000013478 Ailuropoda melanoleuca ENSAMEG00000013478 I 0.000