LBD33 (Arabidopsis lyrata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Al_scaffold_0006_527 T244838_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0006_527 LOB 7 106

Links

Other LOB family TFs
Other Arabidopsis lyrata TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD33 Arabidopsis thaliana AT5G06080 N 0.970
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.970
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.960
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.960
Bra009161 Brassica rapa Bra009161 N 0.919
Bo9g176580 Brassica oleracea Bo9g176580 N 0.919
Thhalv10015772m.g Eutrema salsugineum Thhalv10015772m.g N 0.844
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.818
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.818
TCM_042730 Theobroma cacao TCM_042730 I 0.798
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.788
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.788
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.788
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.788
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.784
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.778
MDP0000123797 Malus domestica MDP0000123797 N 0.778
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.778
30143.m001171 Ricinus communis 30143.m001171 N 0.778
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.778
Ca_16122 Cicer arietinum Ca_16122 N 0.778
Cla004059 Citrullus lanatus Cla004059 N 0.778
Pm018835 Prunus mume Pm018835 N 0.778
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.778
MDP0000133936 Malus domestica MDP0000133936 N 0.768
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.768
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.768
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.755
PK00972.1 Cannabis sativa PK00972.1 I 0.750
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.747
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.747
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.721
Ca_19597 Cicer arietinum Ca_19597 I 0.710
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.707
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.707
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.705