AMTR_s00080p00153120 (Amborella trichopoda)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 AMTR_s00080p00153120 T244854_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN04956 LOB 36 134

Links

Other LOB family TFs
Other Amborella trichopoda TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_04287 Cicer arietinum Ca_04287 I 0.909
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.909
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.899
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.899
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.889
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.889
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.889
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.889
Cla020379 Citrullus lanatus Cla020379 I 0.879
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.879
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.879
Cla000556 Citrullus lanatus Cla000556 I 0.879
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.879
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.879
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.879
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.869
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.869
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.869
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.869
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.869
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.869
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.869
TCM_041094 Theobroma cacao TCM_041094 I 0.869
30111.m000703 Ricinus communis 30111.m000703 I 0.869
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.869
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.869
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.869
PK23777.1 Cannabis sativa PK23777.1 I 0.869
PK27389.1 Cannabis sativa PK27389.1 I 0.869
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.869
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.869
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.869
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.869
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.869
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.859
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.859
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.859
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.859
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.859
Pm018585 Prunus mume Pm018585 I 0.859
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.859
MDP0000123013 Malus domestica MDP0000123013 I 0.859
MDP0000151784 Malus domestica MDP0000151784 I 0.859
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.859
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.859
Ca_14605 Cicer arietinum Ca_14605 I 0.859
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.859
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.848
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.848
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.848
MDP0000319331 Malus domestica MDP0000319331 I 0.848
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.848
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.848
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.848
MDP0000879799 Malus domestica MDP0000879799 N 0.848
MDP0000318244 Malus domestica MDP0000318244 I 0.848
MDP0000218986 Malus domestica MDP0000218986 I 0.848
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.848
TCM_043081 Theobroma cacao TCM_043081 I 0.848
Pm000938 Prunus mume Pm000938 I 0.848
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.848
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.848
OB05G11740 Oryza brachyantha OB05G11740 I 0.848
mgf015666m Mimulus guttatus mgf015666m N 0.848
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.838
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.838
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.838
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.838
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.838
MDP0000822986 Malus domestica MDP0000822986 I 0.838
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.838
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.838
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.830
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.828
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.828
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.828
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.828
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.828
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.828
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.828
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.818
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.818
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.818
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.818
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.818
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.818
Bo01039s010 Brassica oleracea Bo01039s010 N 0.818
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.818
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.818
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.818
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.818
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.818
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.818
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.818
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.818
Ca_02507 Cicer arietinum Ca_02507 N 0.818
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.818
Cla005134 Citrullus lanatus Cla005134 N 0.808
mgf022524m Mimulus guttatus mgf022524m N 0.808
Bra011942 Brassica rapa Bra011942 N 0.808
Bra035698 Brassica rapa Bra035698 N 0.808
Bo4g165420 Brassica oleracea Bo4g165420 N 0.808
LBD11 Arabidopsis thaliana AT2G28500 N 0.808
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.808
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.808
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.798
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.798
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.798
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
Bo8g112780 Brassica oleracea Bo8g112780 N 0.798
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.798
Bo5g008590 Brassica oleracea Bo5g008590 N 0.798
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.798
Bra018675 Brassica rapa Bra018675 N 0.798
Si024430m.g Setaria italica Si024430m.g N 0.798
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.798
Bra000491 Brassica rapa Bra000491 N 0.788
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.788
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.788
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.788
Cla005133 Citrullus lanatus Cla005133 N 0.788
OS03G0287400 Oryza sativa OS03G0287400 N 0.788
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.788
OBART03G13260 Oryza barthii OBART03G13260 N 0.788
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.788
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.788
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.788
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.788
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.788
Bra031599 Brassica rapa Bra031599 N 0.788
Bo3g040220 Brassica oleracea Bo3g040220 N 0.788
Si037280m.g Setaria italica Si037280m.g N 0.778
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.778
OB03G23270 Oryza brachyantha OB03G23270 N 0.778
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.769
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.768
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.768
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.768
mgf019622m Mimulus guttatus mgf019622m N 0.768
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.768
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.768
F775_02335 Aegilops tauschii F775_02335 N 0.768
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.766
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.758
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.758
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.758
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.758
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.747
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N 0.747
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.747
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.737
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.737
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.737
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.737
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.737
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.737
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.737
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.737
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.737
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.737
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.727
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.727
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.727
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.727
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.727
GLYMA18G06530 Glycine max GLYMA18G06530 I 0.727
Pm018982 Prunus mume Pm018982 I 0.727
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.727
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.727
Ca_13575 Cicer arietinum Ca_13575 I 0.727
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.727
F775_08326 Aegilops tauschii F775_08326 I 0.727
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I 0.727
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.727
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.727
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I 0.717
TCM_042447 Theobroma cacao TCM_042447 I 0.717
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.717
Eucgr.G03089 Eucalyptus grandis Eucgr.G03089 I 0.717
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I 0.717
MDP0000268890 Malus domestica MDP0000268890 I 0.717
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.717
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I 0.717
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.717
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.717
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.717
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I 0.717
Lus10040638.g Linum usitatissimum Lus10040638.g I 0.717
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I 0.717
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.717
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.717
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.717
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.717
MDP0000284409 Malus domestica MDP0000284409 I 0.717
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I 0.717
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.717
cassava20865.m1 Manihot esculenta cassava20865.m1 I 0.717
TCM_032557 Theobroma cacao TCM_032557 I 0.717
cassava27818.m1 Manihot esculenta cassava27818.m1 I 0.717
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.717
Cucsa.118370 Cucumis sativus Cucsa.118370 I 0.717
mgf018189m Mimulus guttatus mgf018189m I 0.717
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I 0.717
MDP0000121203 Malus domestica MDP0000121203 I 0.717
MDP0000155138 Malus domestica MDP0000155138 I 0.717
30169.m006340 Ricinus communis 30169.m006340 I 0.717
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.717
Cla013678 Citrullus lanatus Cla013678 I 0.717
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.717
PK11564.1 Cannabis sativa PK11564.1 I 0.717
Pm011040 Prunus mume Pm011040 I 0.717
29729.m002278 Ricinus communis 29729.m002278 I 0.717
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.707
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I 0.707
MDP0000861160 Malus domestica MDP0000861160 I 0.707
Bo4g059700 Brassica oleracea Bo4g059700 I 0.707
GLYMA14G06140 Glycine max GLYMA14G06140 I 0.707
TCM_029315 Theobroma cacao TCM_029315 I 0.707
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I 0.707
MTR_4g083680 Medicago truncatula MTR_4g083680 I 0.707
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.707
LBD12 Arabidopsis thaliana AT2G30130 I 0.707
GSMUA_Achr5G29470_001 Musa acuminata GSMUA_Achr5G29470_001 I 0.707
chr6.CM0738.260.nd Lotus japonicus chr6.CM0738.260.nd I 0.707
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.707
SapurV1A.0094s0480 Salix purpurea SapurV1A.0094s0480 I 0.707
POPTR_0001s11610 Populus trichocarpa POPTR_0001s11610 I 0.707
PRUPE_ppa012275mg Prunus persica PRUPE_ppa012275mg I 0.707
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.707
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.707
POPTR_0003s14880 Populus trichocarpa POPTR_0003s14880 I 0.707
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.707
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.707
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I 0.707
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.707
Cla009336 Citrullus lanatus Cla009336 I 0.707
Bra018335 Brassica rapa Bra018335 I 0.707
Cla005598 Citrullus lanatus Cla005598 I 0.707
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.707
Ca_12450 Cicer arietinum Ca_12450 I 0.707
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.707
Pm000193 Prunus mume Pm000193 I 0.707
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.707
mgf026046m Mimulus guttatus mgf026046m I 0.707
mgf022958m Mimulus guttatus mgf022958m I 0.707
Bra021612 Brassica rapa Bra021612 I 0.707
cassava20471.m1 Manihot esculenta cassava20471.m1 I 0.707
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.707
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I 0.707
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.707
Ca_06548 Cicer arietinum Ca_06548 I 0.707
gene28202-v1.0-hybrid Fragaria vesca gene28202-v1.0-hybrid I 0.707
Lus10031285.g Linum usitatissimum Lus10031285.g I 0.707
Lus10018275.g Linum usitatissimum Lus10018275.g I 0.707
LBD4 Vitis vinifera VIT_00s0125g00290 I 0.707
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.707
Bo4g170770 Brassica oleracea Bo4g170770 I 0.707
MDP0000194766 Malus domestica MDP0000194766 I 0.707
TCM_042212 Theobroma cacao TCM_042212 I 0.707
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.707
Cucsa.236600 Cucumis sativus Cucsa.236600 I 0.707
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.707
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I 0.707
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.707
Gorai.004G234100 Gossypium raimondii Gorai.004G234100 I 0.707
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.707
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I 0.707
MDP0000265429 Malus domestica MDP0000265429 I 0.707