CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA003804
(
Oryza indica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
BGIOSGA003804
T244918_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA003804-PA
LOB
40
138
ACAACKHQRRRCTPECRLARYFPANQPARFRNAHRLFGIKNILRVMASASEELRDDAMKSVVYESDAWVIDPVGGAAGIVKGLSQELARLKAELDAVKG
Links
Other
LOB
family TFs
Other
Oryza indica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI01G22730
Oryza rufipogon
ORUFI01G22730
N
1.000
ORGLA01G0167100
Oryza glaberrima
ORGLA01G0167100
N
1.000
ONIVA01G22730
Oryza nivara
ONIVA01G22730
N
1.000
OBART01G20170
Oryza barthii
OBART01G20170
N
1.000
OPUNC01G20540
Oryza punctata
OPUNC01G20540
N
0.889
LPERR01G17320
Leersia perrieri
LPERR01G17320
N
0.707