CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA003810
(
Oryza indica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
BGIOSGA003810
T244922_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA003810-PA
LOB
11
112
PCAACAHQGRPSCPAGCPLAPYFPADRPERFEYANLLFGVDGILRRLEAAGPDTVTRRATMASIVFVSDARAADPVHGAYGVIRNLQQELASVKAEIAAIRQ
Links
Other
LOB
family TFs
Other
Oryza indica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA01G22790
Oryza nivara
ONIVA01G22790
N
1.000
OGLUM01G23830
Oryza glumaepatula
OGLUM01G23830
N
1.000
OBART01G20240
Oryza barthii
OBART01G20240
N
1.000
ORGLA01G0167400
Oryza glaberrima
ORGLA01G0167400
N
0.990
ORUFI01G22810
Oryza rufipogon
ORUFI01G22810
N
0.990
OS01G0571800
Oryza sativa
OS01G0571800
N
0.970
ORUFI01G22650
Oryza rufipogon
ORUFI01G22650
N
0.970
ORGLA01G0166400
Oryza glaberrima
ORGLA01G0166400
N
0.970
ONIVA01G22650
Oryza nivara
ONIVA01G22650
N
0.970
BGIOSGA001368
Oryza indica
BGIOSGA001368
N
0.970
BGIOSGA001369
Oryza indica
BGIOSGA001369
N
0.970
OMERI01G18670
Oryza meridionalis
OMERI01G18670
N
0.909
OBART01G20230
Oryza barthii
OBART01G20230
N
0.907