Bo5g008590 (Brassica oleracea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Bo5g008590 T244995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g008590.1 LOB 70 168

Links

Other LOB family TFs
Other Brassica oleracea TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra018675 Brassica rapa Bra018675 N 1.000
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.960
LBD11 Arabidopsis thaliana AT2G28500 N 0.929
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.929
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.929
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.919
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.919
Bo8g112780 Brassica oleracea Bo8g112780 N 0.919
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.919
Bo01039s010 Brassica oleracea Bo01039s010 N 0.919
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.909
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.909
Bra035698 Brassica rapa Bra035698 N 0.909
Bo4g165420 Brassica oleracea Bo4g165420 N 0.909
Bra011942 Brassica rapa Bra011942 N 0.909
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.909
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.909
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.899
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.899
Bra031599 Brassica rapa Bra031599 N 0.899
PK27389.1 Cannabis sativa PK27389.1 I 0.899
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.899
TCM_041094 Theobroma cacao TCM_041094 I 0.889
Bo3g040220 Brassica oleracea Bo3g040220 N 0.889
Bra000491 Brassica rapa Bra000491 N 0.889
30111.m000703 Ricinus communis 30111.m000703 I 0.889
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.889
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.879
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.879
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.879
Ca_14605 Cicer arietinum Ca_14605 I 0.879
Pm000938 Prunus mume Pm000938 I 0.879
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.879
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.879
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.879
MDP0000318244 Malus domestica MDP0000318244 I 0.879
MDP0000218986 Malus domestica MDP0000218986 I 0.879
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.879
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.879
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.879
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.869
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.869
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.869
MDP0000319331 Malus domestica MDP0000319331 I 0.869
PK23777.1 Cannabis sativa PK23777.1 I 0.869
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.869
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.869
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.869
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.869
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.869
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.869
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.869
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.869
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.869
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.859
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.859
Cla020379 Citrullus lanatus Cla020379 I 0.859
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.859
TCM_043081 Theobroma cacao TCM_043081 I 0.859
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.859
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.859
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.849
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.848
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.848
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.848
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.848
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.848
Ca_04287 Cicer arietinum Ca_04287 I 0.848
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.848
Pm018585 Prunus mume Pm018585 I 0.848
OBART05G01640 Oryza barthii OBART05G01640 N 0.846
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.843
OMERI05G01740 Oryza meridionalis OMERI05G01740 N 0.843
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.838
Cla000556 Citrullus lanatus Cla000556 I 0.838
mgf022524m Mimulus guttatus mgf022524m N 0.838
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.838
MDP0000123013 Malus domestica MDP0000123013 I 0.838
MDP0000822986 Malus domestica MDP0000822986 I 0.838
MDP0000151784 Malus domestica MDP0000151784 I 0.838
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.838
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.838
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.838
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.838
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.838
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.828
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.828
MDP0000879799 Malus domestica MDP0000879799 N 0.828
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.828
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.828
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.821
OB05G11740 Oryza brachyantha OB05G11740 I 0.818
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.818
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.818
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.818
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.818
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.808
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.808
mgf019622m Mimulus guttatus mgf019622m N 0.808
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.808
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.808
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.808
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.808
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.808
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.808
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.800
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.798
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.798
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.798
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.798
mgf015666m Mimulus guttatus mgf015666m N 0.798
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.798
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.798
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.798
Cla005134 Citrullus lanatus Cla005134 N 0.798
Cla005133 Citrullus lanatus Cla005133 N 0.798
Si024430m.g Setaria italica Si024430m.g N 0.798
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.798
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.798
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.798
Si037280m.g Setaria italica Si037280m.g N 0.788
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.788
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.788
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.788
Ca_02507 Cicer arietinum Ca_02507 N 0.788
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.788
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.788
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.788
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.787
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.783
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.778
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.778
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.778
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.778
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.778
OS03G0287400 Oryza sativa OS03G0287400 N 0.778
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.778
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.778
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.778
OBART03G13260 Oryza barthii OBART03G13260 N 0.778
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.778
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.768
OB03G23270 Oryza brachyantha OB03G23270 N 0.768
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.768
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.761
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.759
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.758
F775_02335 Aegilops tauschii F775_02335 N 0.758
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.758
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.758
Cucsa.358620 Cucumis sativus Cucsa.358620 N 0.750
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.747
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.747
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.737
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.737
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.737
PK17019.1 Cannabis sativa PK17019.1 I 0.735
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.717
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.717
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.717
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.717
PK09808.1 Cannabis sativa PK09808.1 I 0.714
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.713
Cucsa.011680 Cucumis sativus Cucsa.011680 N 0.711
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.707
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.707
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.707
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.702
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.702
OS03G0659700 Oryza sativa OS03G0659700 I 0.702
OS05G0123000 Oryza sativa OS05G0123000 I 0.702